RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OR13C2Q8NGS9 318 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 PFN4Q8NHR9 129 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ABHD5Q8WTS1 349 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 THEM6Q8WUY1 208 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 RAB40AQ8WXH6 277 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 APH1AQ96BI3 265 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 DNAJA3Q96EY1 480 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ERMAPQ96PL5 475 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 GPX7Q96SL4 187 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 IFT27Q9BW83 186 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 HRASLSQ9HDD0 168 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MMP26Q9NRE1 261 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF222Q9UK12 451 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MED31Q9Y3C7 131 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ETV7Q9Y603 341 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 TRBV5-5A0A0J9YX44 114 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 hCG_1807616A0A1W2PRN6 198 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 IFITM5A6NNB3 132 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 HMSDA8MTL9 139 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 A8MXK9 166 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF879B4DU55 563 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 NPIPB9F8W1W9 429 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 J3QLW9 94 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 KRT33AO76009 404 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 OR7A10O76100 309 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 RGS11O94810 467 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 NDUFB6O95139 128 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF19P17023 458 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CTRB1P17538 263 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 PRKACBP22694 351 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ACAA2P42765 397 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF81P51508 661 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CCR6P51684 374 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 BLVRAP53004 296 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 SLC3A1Q07837 685 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 C17orf67Q0P5P2 114 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 OPCMLQ14982 345 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CD226Q15762 336 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 MPPED2Q15777 294 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 TOMM34Q15785 309 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF626Q68DY1 528 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CTRB2Q6GPI1 263 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 OR7E24Q6IFN5 339 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 KRT74Q7RTS7 529 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 OR8H3Q8N146 312 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 LGALS14Q8TCE9 139 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 LIPHQ8WWY8 451 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 OIT3Q8WWZ8 545 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CNOT9Q92600 299 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 RDH5Q92781 318 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 RBPMSQ93062 196 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 HAVCR1Q96D42 359 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 MRPL48Q96GC5 212 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 CNN2Q99439 309 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 MRPL37Q9BZE1 423 aaKnown RBP6.43□□□□□ -1.38
SMAD4-209ENST00000589941 PPA2Q9H2U2 334 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF442Q9H7R0 627 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 EQTNQ9NQ60 294 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 SLC7A10Q9NS82 523 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 GLS2Q9UI32 602 aa6.43□□□□□ -1.38
SMAD4-209ENST00000589941 IGKV3D-15A0A087WSY6 115 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 TRBV5-7A0A0A0MS05 114 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 A0A1B0GWA3 101 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 WI2-2373I1.2A0A1W2PRP0 233 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 MCRIP1C9JLW8 97 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 I3L521 148 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 M0R233 179 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 GMDSO60547 372 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 NDUFB2O95178 105 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 CRYAAP02489 173 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 MT-ND4P03905 459 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 FGF2P09038 288 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 ACSM4P0C7M7 580 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 CD37P11049 281 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 FUT1P19526 365 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 CXCL2P19875 107 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 PYCR1P32322 319 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 SLC25A1P53007 311 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF117Q03924 483 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 SSBP1Q04837 148 aaKnown RBP6.42□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF141Q15928 474 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 NDUFAF6Q330K2 333 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 TMEM255AQ5JRV8 349 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 Q6ZTK2 550 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 LINGO2Q7L985 606 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 SLC36A1Q7Z2H8 476 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-209ENST00000589941 LRP11Q86VZ4 500 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 SLC35F2Q8IXU6 374 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 C17orf78Q8N4C9 275 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 FTMTQ8N4E7 242 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 NPEPL1Q8NDH3 523 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 NUP37Q8NFH4 326 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 OR13C5Q8NGS8 318 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 OR2T35Q8NGX2 323 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 RGP1Q92546 391 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-209ENST00000589941 DERL3Q96Q80 235 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 TBX5Q99593 518 aa6.42□□□□□ -1.38
SMAD4-209ENST00000589941 LMF2Q9BU23 707 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms