RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FAM90A16PA6NEW6 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A20PA6NIJ5 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A8PA6NJQ4 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A7PA6NKC0 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A22PA8MWA6 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A12PA8MX19 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A5PA8MXJ8 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A23PA8MXZ1 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 SIRPB1O00241 398 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 DVL1O14640 695 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 SMAD7O15105 426 aaKnown RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 PAHP00439 452 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A15PP0C7V4 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A13PP0C7W8 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A14PP0C7W9 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A24PP0C7X0 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 RAB6AP20340 208 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 IL2RGP31785 369 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 NPY4RP50391 375 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 SCAND1P57086 179 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 RPS27AP62979 156 aaKnown RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 PDCD1Q15116 288 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 TAF9Q16594 264 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 Q6P435 159 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 PPP1R35Q8TAP8 253 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 AP3S1Q92572 193 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 PTX4Q96A99 478 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 DGCR14Q96DF8 476 aaKnown RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 SSBP3Q9BWW4 388 aaPredicted RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
VMP1-210ENST00000589823 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 ETV7Q9Y603 341 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 A0A1B0GW55 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 METTL21EPA6NDL7 271 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 GPR37O15354 613 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 FOXH1O75593 365 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 TK1P04183 234 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 SELLP14151 372 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 ZNF182P17025 639 aaPredicted RBP11.33□□□□□ -0.6
VMP1-210ENST00000589823 NDUFB7P17568 137 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 LMO1P25800 156 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 GZMKP49863 264 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 WDR25Q64LD2 544 aaPredicted RBP11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
VMP1-210ENST00000589823 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 CIARTQ8N365 385 aaPredicted RBP11.33□□□□□ -0.6
VMP1-210ENST00000589823 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DYNC2LI1Q8TCX1 351 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 ACOT12Q8WYK0 555 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 ST8SIA4Q92187 359 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 LPAR5Q9H1C0 372 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 IFT22Q9H7X7 185 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 BATF3Q9NR55 127 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
VMP1-210ENST00000589823 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 B4DSR2 109 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 K7N7A8 449 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 PHF1O43189 567 aaPredicted RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 SEC61A1P61619 476 aaKnown RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 GRK1Q15835 563 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 PAN3Q58A45 887 aaKnown RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 MZT2AQ6P582 158 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 OR8H2Q8N162 312 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 COX4I2Q96KJ9 171 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 NEDD4LQ96PU5 975 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 NICN1Q9BSH3 213 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
VMP1-210ENST00000589823 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
VMP1-210ENST00000589823 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 TMEM82A0PJX8 343 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 MCRIP1C9JLW8 97 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 HSPB6O14558 160 aa11.31□□□□□ -0.6
VMP1-210ENST00000589823 MGST3O14880 152 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms