RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SRRM5B3KS81 715 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 EGR1P18146 543 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 CPT2P23786 658 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 VEGFCP49767 419 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 GZMKP49863 264 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 SNU13P55769 128 aaKnown RBP17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 ZNF79Q15937 498 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 TMEM69Q5SWH9 247 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 FAM201AQ5SY85 155 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 FAM131AQ6UXB0 335 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 GCSAMQ8N6F7 178 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 SMR3AQ99954 134 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 ZNF581Q9P0T4 197 aa17.78■□□□□ 0.44
R3HDM4-204ENST00000589428 A0A0G2JMP0 313 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 A0A0X1KG70 313 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 FOXI3A8MTJ6 420 aaPredicted RBP17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 GEMIN2O14893 280 aaKnown RBP17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 SOCS1O15524 211 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 XRCC3O43542 346 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 GABRR1P24046 479 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 IL2RGP31785 369 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 PITPNBP48739 271 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 TAF9Q16594 264 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 CLEC9AQ6UXN8 241 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 RTN4RL2Q86UN3 420 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 OR4M2Q8NGB6 313 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 PHF21AQ96BD5 680 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 SEH1LQ96EE3 360 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 ZNF665Q9H7R5 613 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 PCDHB10Q9UN67 800 aa17.77■□□□□ 0.44
R3HDM4-204ENST00000589428 A0A0A6YYH2 397 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 A6NJ64 397 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 FSTL3O95633 263 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 LHBP01229 141 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 CD80P33681 288 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 ZNF45Q02386 682 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 IL18Q14116 193 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 FAM189A2Q15884 450 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 OR56B1Q8NGI3 324 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 DIABLOQ9NR28 239 aa17.76■□□□□ 0.43
R3HDM4-204ENST00000589428 IGHV2-5P01817 119 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 IGHV4-31P0DP07 118 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 GLRA1P23415 457 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 TAS2R20P59543 309 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 KCNJ8Q15842 424 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 SIGIRRQ6IA17 410 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 RAB12Q6IQ22 244 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 ACP7Q6ZNF0 438 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 OR10R2Q8NGX6 335 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 CYYR1Q96J86 154 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 WDR12Q9GZL7 423 aaKnown RBP17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 MRPS7Q9Y2R9 242 aaKnown RBP17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 ZANQ9Y493 2812 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 OOEPA6NGQ2 149 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 LGALS8O00214 317 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 SCGNO76038 276 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 LY6G6DO95868 133 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 CHRM2P08172 466 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 DUSP1P28562 367 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 LMO4P61968 165 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 ZNF846Q147U1 533 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 SMIM21Q3B7S5 101 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 CYB5R2Q6BCY4 276 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 SFRP4Q6FHJ7 346 aaPredicted RBP17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 BAIAP2L2Q6UXY1 529 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 C19orf18Q8NEA5 215 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 DEFB108BQ8NET1 73 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 ABHD1Q96SE0 405 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 NUDT16L1Q9BRJ7 211 aaKnown RBP17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 TMEM165Q9HC07 324 aa17.75■□□□□ 0.43
R3HDM4-204ENST00000589428 TRAV18A0A075B6X5 111 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 TRAV38-1A0A0B4J264 116 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 HLA-DQB1P01920 261 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 MNDAP41218 407 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 TMEM50BP56557 158 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 PDCD1Q15116 288 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 PLAC9Q5JTB6 97 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 SRRQ9GZT4 340 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 GSX1Q9H4S2 264 aaPredicted RBP17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 RASL12Q9NYN1 266 aa17.74■□□□□ 0.43
R3HDM4-204ENST00000589428 CEACAM18A8MTB9 384 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 J3QRK9 145 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 CD5LO43866 347 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 OR7C1O76099 320 aaPredicted RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 RPS2P15880 293 aaKnown RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 ZNF16P17020 682 aaPredicted RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 PTBP1P26599 531 aaKnown RBP eCLIP17.73■□□□□ 0.432e-8■■□□□ 12.6
R3HDM4-204ENST00000589428 BLVRBP30043 206 aaPredicted RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 KRTAP1-1Q07627 177 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 IL13RA2Q14627 380 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 SNX29P2Q8IUI4 249 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 GCDHQ92947 438 aaPredicted RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 RAB3CQ96E17 227 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 ARHGAP5-AS1Q96IT6 56 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 TMEM246Q9BRR3 403 aa17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 ZMAT3Q9HA38 289 aaKnown RBP17.73■□□□□ 0.43
R3HDM4-204ENST00000589428 FAM90A10PA6NDY2 464 aa17.72■□□□□ 0.43
R3HDM4-204ENST00000589428 FAM90A18PA6NE21 464 aa17.72■□□□□ 0.43
R3HDM4-204ENST00000589428 FAM90A16PA6NEW6 464 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms