RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PRSS3	P35030	304 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	GLP1R	P43220	463 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	PPT1	P50897	306 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	AKR1C2	P52895	323 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	UCN	P55089	124 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	PRSS12	P56730	875 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	QRFP	P83859	136 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	AKR1C1	Q04828	323 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	DMRTC1	Q5HYR2	192 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR10K2	Q6IF99	312 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	DPPA2	Q7Z7J5	298 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	C1QL4	Q86Z23	238 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	RPRML	Q8N4K4	120 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	PP6455	Q8WZ26	134 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	SPSB4	Q96A44	273 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	C14orf79	Q96F83	325 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	PLSCR4	Q9NRQ2	329 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF391	Q9UJN7	358 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZZEF1	O43149	2961 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	C5orf49	A4QMS7	147 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	SELL	P14151	372 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF93	P35789	620 aa	Predicted RBP	13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAM3A	P98173	230 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	CD163	Q86VB7	1156 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	SEMA6D	Q8NFY4	1073 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	PPP1R1C	Q8WVI7	109 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	STARD4	Q96DR4	205 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAHD2A	Q96GK7	314 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	C1orf147	Q96MC9	270 aa	Predicted RBP	13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	TOLLIP	Q9H0E2	274 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	RGCC	Q9H4X1	137 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	RHOF	Q9HBH0	211 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	LPAR3	Q9UBY5	353 aa		13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	MAP1B	P46821	2468 aa	Known RBP	13.28	□□□□□ -0.28
DDX39A-209	ENST00000589318	TRBV6-7	A0A0A0MS04	114 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	TXNL1	O43396	289 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	WDR1	O75083	606 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	LYZL6	O75951	148 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	SLC34A2	O95436	690 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAM87A	P0C7U9	286 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	NFYB	P25208	207 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	CYCS	P99999	105 aa	Known RBP	13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR8B8	Q15620	311 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	GABRA6	Q16445	453 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	MDP1	Q86V88	176 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	GABRG1	Q8N1C3	465 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	NAXE	Q8NCW5	288 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	BOD1	Q96IK1	185 aa		13.27	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	RNASEK-C17orf49	H0YIS7	233 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	XRCC2	O43543	280 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAD51D	O75771	328 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	PTHLH	P12272	177 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	CBR1	P16152	277 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	GSK3A	P49840	483 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	UNC119	Q13432	240 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	TMEM42	Q69YG0	159 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	CISD2	Q8N5K1	135 aa	Known RBP	13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	BOLL	Q8N9W6	283 aa	Known RBP	13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	FAM57A	Q8TBR7	257 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	PTX4	Q96A99	478 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB3C	Q96E17	227 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	SMIM8	Q96KF7	97 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	GGACT	Q9BVM4	153 aa		13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	NOP16	Q9Y3C1	178 aa	Known RBP	13.27	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZGRF1	Q86YA3	2104 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	TLN1	Q9Y490	2541 aa	Known RBP	13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	TRBV23-1	A0A0A0MS06	115 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	C9orf170	A2RU37	121 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	BPNT1	O95861	308 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	CD5	P06127	495 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	HCK	P08631	526 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR8U8	P0C7N1	319 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	VSIG8	P0DPA2	414 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	CCNO	P22674	350 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	PTGER4	P35408	488 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR3A4P	P47883	348 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	TGFBR3	Q03167	851 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	DHRS2	Q13268	280 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	C1orf185	Q5T7R7	199 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	SSX9	Q7RTT3	188 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	MYPOP	Q86VE0	399 aa	Predicted RBP	13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	GPX8	Q8TED1	209 aa		13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	NANOS1	Q8WY41	292 aa	Known RBP	13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	RBM14	Q96PK6	669 aa	Known RBP	13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.26	□□□□□ -0.29
DDX39A-209	ENST00000589318	NCOR2	Q9Y618	2525 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	FIGNL2	A6NMB9	653 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB3D	O95716	219 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	IFNA17	P01571	189 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	SERPINA5	P05154	406 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	SFTA3	P0C7M3	94 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	FAM157C	P0CG43	387 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	MUC1	P15941	1255 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB6A	P20340	208 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	WNT5A	P41221	380 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	REL	Q04864	619 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	PLP2	Q04941	152 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms