RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.62
VMP1-209ENST00000588915 PCDHGB5Q9Y5G0 923 aa11.15□□□□□ -0.62
VMP1-209ENST00000588915 A0A087X0M5 115 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 A0A1B0GX30 115 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 ZAR1LA6NP61 321 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 SH2D1BO14796 132 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 ENTPD6O75354 484 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 AMY1AP04745 511 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 AMY2AP04746 511 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 UBCP0CG48 685 aaKnown RBP11.14□□□□□ -0.63
VMP1-209ENST00000588915 PRKACBP22694 351 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 MNDAP41218 407 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 OR3A1P47881 315 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 NPBWR2P48146 333 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 PRRX1P54821 245 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 TMED1Q13445 227 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 FLOT2Q14254 428 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 C12orf73Q69YU5 71 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 UTS2BQ765I0 119 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 SPATA24Q86W54 205 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 OSR2Q8N2R0 312 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 OR51D1Q8NGF3 324 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 WWC2-AS2Q96NR7 200 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
VMP1-209ENST00000588915 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
VMP1-209ENST00000588915 WI2-2373I1.2A0A1W2PRP0 233 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 BUB1B-PAK6H3BSN5 160 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 INMTO95050 263 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 CSN2P05814 226 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 CDK2P24941 298 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 CD24P25063 80 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 GYS2P54840 703 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 MTCP1P56278 107 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 KPNB1Q14974 876 aaKnown RBP11.13□□□□□ -0.63
VMP1-209ENST00000588915 ODF4Q2M2E3 257 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 LHFPL2Q6ZUX7 228 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 SSX6Q7RTT6 188 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 UTP4Q969X6 686 aaKnown RBP11.13□□□□□ -0.63
VMP1-209ENST00000588915 B9D2Q9BPU9 175 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 HMG20AQ9NP66 347 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 EXOSC4Q9NPD3 245 aaKnown RBP11.13□□□□□ -0.63
VMP1-209ENST00000588915 PCDHB16Q9NRJ7 776 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 IL36RNQ9UBH0 155 aa11.13□□□□□ -0.63
VMP1-209ENST00000588915 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A18PA6NE21 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A16PA6NEW6 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A20PA6NIJ5 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A9PA6NNJ1 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A12PA8MX19 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A5PA8MXJ8 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 LY6LH3BQJ8 138 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 TOR1AO14656 332 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A15PP0C7V4 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A13PP0C7W8 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A14PP0C7W9 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM90A24PP0C7X0 464 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 FAM106CPP0CH98 169 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 PRKACAP17612 351 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 BCL3P20749 454 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 DUSP1P28562 367 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 HTR1FP30939 366 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 CD69Q07108 199 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 PRSS35Q8N3Z0 413 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 OR4D6Q8NGJ1 314 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 IL4I1Q96RQ9 567 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 ZFP57Q9NU63 452 aa11.12□□□□□ -0.63
VMP1-209ENST00000588915 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 LOC107986453A0A1B0GWG9 222 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
VMP1-209ENST00000588915 OR2H2O95918 312 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 ISG15P05161 165 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 ATF1P18846 271 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 EPHA2P29317 976 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 PTGFRP43088 359 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 THBS3P49746 956 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 ISL1P61371 349 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 PRAMEF5Q5TYX0 476 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 KDM4DQ6B0I6 523 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 C10orf99Q6UWK7 81 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 KCTD20Q7Z5Y7 419 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
VMP1-209ENST00000588915 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 CHST4Q8NCG5 386 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 TBX5Q99593 518 aa11.11□□□□□ -0.63
VMP1-209ENST00000588915 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms