RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 GAFA1Q96PS6 74 aa9.53□□□□□ -0.88
RFX1-204ENST00000588885 GFI1Q99684 422 aa9.53□□□□□ -0.88
RFX1-204ENST00000588885 SIRPDQ9H106 197 aa9.53□□□□□ -0.88
RFX1-204ENST00000588885 CCDC59Q9P031 241 aaKnown RBP9.53□□□□□ -0.88
RFX1-204ENST00000588885 RPUSD1Q9UJJ7 312 aaKnown RBP9.53□□□□□ -0.88
RFX1-204ENST00000588885 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 NKX6-3A6NJ46 265 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 OR2AT4A6NND4 320 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 MTRF1O75570 445 aaKnown RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 IL1AP01583 271 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 NDUFB7P17568 137 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 RPS19P39019 145 aaKnown RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 COMPP49747 757 aaPredicted RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 LRRC10Q5BKY1 277 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 CLVS2Q5SYC1 327 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 ATPAF1Q5TC12 328 aaPredicted RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 PARP16Q8N5Y8 322 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 OR5A2Q8NGI9 324 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 ANGPTL6Q8NI99 470 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 ZNF671Q8TAW3 534 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 NPRL2Q8WTW4 380 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 AQP3Q92482 292 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 NKX3-1Q99801 234 aaPredicted RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 BARHL1Q9BZE3 327 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 CHST5Q9GZS9 411 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 ELL3Q9HB65 397 aaPredicted RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 TCF7L1Q9HCS4 588 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 PTTG2Q9NZH5 202 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 NLKQ9UBE8 527 aa9.52□□□□□ -0.89
RFX1-204ENST00000588885 AK6Q9Y3D8 172 aaKnown RBP9.52□□□□□ -0.89
RFX1-204ENST00000588885 IGKV1D-17A0A075B6S4 117 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 IGHV1-69DA0A0B4J2H0 117 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 DHRS7CA6NNS2 312 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 SYNGR1O43759 233 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 IGHV1-69P01742 117 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 MAS1P04201 325 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
RFX1-204ENST00000588885 ACAA1P09110 424 aaPredicted RBP9.51□□□□□ -0.89
RFX1-204ENST00000588885 HKR1P10072 659 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 PSG2P11465 335 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 RAB3BP20337 219 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 OMGP23515 440 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 HAAOP46952 286 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 CAPZA1P52907 286 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 PPP3R1P63098 170 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 IL13RA1P78552 427 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 ANGPTL5Q86XS5 388 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 ZNRF1Q8ND25 227 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 LY6G5BQ8NDX9 201 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 TRMT10AQ8TBZ6 339 aaKnown RBP9.51□□□□□ -0.89
RFX1-204ENST00000588885 SLC25A46Q96AG3 418 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 MED30Q96HR3 178 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 SLITRK2Q9H156 845 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 ZCCHC4Q9H5U6 513 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 CKLFQ9UBR5 152 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
RFX1-204ENST00000588885 FOXJ3Q9UPW0 622 aa9.51□□□□□ -0.89
RFX1-204ENST00000588885 IGKV1-9A0A0C4DH69 117 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 FAM230AA0A1W2PPH8 454 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 A0A1W2PQ09 198 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 OR5B21A6NL26 309 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 RFPL4AA6NLU0 287 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 RFPL4AL1F8VTS6 287 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 PDCD5O14737 125 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 SULT1B1O43704 296 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 SRMP19623 302 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 RAB3AP20336 220 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 CEBPDP49716 269 aaPredicted RBP9.5□□□□□ -0.89
RFX1-204ENST00000588885 FOXL1Q12952 345 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 PDCD1Q15116 288 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 LCE2CQ5TA81 110 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 ZBTB37Q5TC79 503 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 DDI2Q5TDH0 399 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 ZNF529Q6P280 563 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 SFXN4Q6P4A7 337 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 C16orf87Q6PH81 154 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 RNF144BQ7Z419 303 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 PNKDQ8N490 385 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 TMEM185AQ8NFB2 350 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 C10orf35Q96D05 121 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 DCTN5Q9BTE1 182 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 SLIRPQ9GZT3 109 aaKnown RBP9.5□□□□□ -0.89
RFX1-204ENST00000588885 MAB21L2Q9Y586 359 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
RFX1-204ENST00000588885 PQLC2LA1A4F0 135 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 CLDN34H7C241 214 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 J3QT63 122 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 SIGLEC5O15389 551 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 NXPH2O95156 264 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 MELTFP08582 738 aa9.49□□□□□ -0.89
RFX1-204ENST00000588885 SLC2A2P11168 524 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms