RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 EXOSC4Q9NPD3 245 aaKnown RBP16.63■□□□□ 0.25
DDX39A-207ENST00000588542 NDUFB11Q9NX14 153 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 ONECUT1Q9UBC0 465 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 GLS2Q9UI32 602 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 NUP50Q9UKX7 468 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 SIRPB1O00241 398 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 IFNA2P01563 188 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 LMO1P25800 156 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 BMXP51813 675 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 METTL11BQ5VVY1 283 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 NKAIN3Q8N8D7 197 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 OR4S1Q8NGB4 309 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 OR4M1Q8NGD0 313 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 OR4D6Q8NGJ1 314 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 C1orf147Q96MC9 270 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-207ENST00000588542 METTL9Q9H1A3 318 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 TCF7L1Q9HCS4 588 aa16.62■□□□□ 0.25
DDX39A-207ENST00000588542 ATRQ13535 2644 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 IGHV3OR16-10A0A075B7F0 116 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 TRAV40A0A0B4J280 105 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 A0A1W2PQ09 198 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 MEGF11A6BM72 1044 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 HTR3BO95264 441 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 CD37P11049 281 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 GABRR1P24046 479 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 OR3A1P47881 315 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 RPL31P62899 125 aaKnown RBP16.61■□□□□ 0.25
DDX39A-207ENST00000588542 PDCD1Q15116 288 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 TUSC1Q2TAM9 212 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 PIGYQ3MUY2 71 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 TMEM200BQ69YZ2 307 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 CD200R1LQ6Q8B3 271 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 FAM185AQ8N0U4 392 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 OR5D13Q8NGL4 314 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 FCGR1BQ92637 280 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-207ENST00000588542 CHST6Q9GZX3 395 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 ZNF69Q9UC07 566 aa16.61■□□□□ 0.25
DDX39A-207ENST00000588542 MRPS28Q9Y2Q9 187 aaKnown RBP16.61■□□□□ 0.25
DDX39A-207ENST00000588542 FBN1P35555 2871 aaKnown RBP16.6■□□□□ 0.25
DDX39A-207ENST00000588542 KIAA2026Q5HYC2 2103 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 A0A0G2JK05 382 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 A0A1W2PP11 408 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 PSMB9P28065 219 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 SCN1BQ07699 218 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 IL13RA2Q14627 380 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 GRK1Q15835 563 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 NHLRC3Q5JS37 347 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 GLIPR1L1Q6UWM5 242 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 VMO1Q7Z5L0 202 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 OSR2Q8N2R0 312 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 C22orf15Q8WYQ4 148 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 UQCC2Q9BRT2 126 aa16.6■□□□□ 0.25
DDX39A-207ENST00000588542 CENPVL3A0A0U1RRI6 287 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 M0R1W7 72 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 SLC33A1O00400 549 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-207ENST00000588542 CCRL2O00421 344 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 ZNF44P15621 663 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 SERPINA2P20848 420 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 DLX1P56177 255 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 ZNF273Q14593 569 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 KRTAP21-3Q3LHN1 58 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 SLC22A6Q4U2R8 563 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 C1orf100Q5SVJ3 147 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 C1orf122Q6ZSJ8 110 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 GDPD3Q7L5L3 318 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 CMTM4Q8IZR5 234 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 BCL6BQ8N143 479 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-207ENST00000588542 TBC1D15Q8TC07 691 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 S100A13Q99584 98 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 GFI1Q99684 422 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 ZNF581Q9P0T4 197 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 ST3GAL6Q9Y274 331 aa16.59■□□□□ 0.25
DDX39A-207ENST00000588542 SOX21Q9Y651 276 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-207ENST00000588542 MGST3O14880 152 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 DEGS1O15121 323 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 ZNF780AO75290 641 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-207ENST00000588542 ARL6IP5O75915 188 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 CSTBP04080 98 aaKnown RBP16.58■□□□□ 0.24
DDX39A-207ENST00000588542 EDDM3BP56851 147 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 RBM11P57052 281 aaKnown RBP16.58■□□□□ 0.24
DDX39A-207ENST00000588542 SCGB2A2Q13296 93 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 EDDM3AQ14507 147 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 AWAT2Q6E213 333 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 TCF23Q7RTU1 214 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 C11orf42Q8N5U0 333 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 TPRX1Q8N7U7 411 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 CHST4Q8NCG5 386 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 TNFRSF14Q92956 283 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 LHX4Q969G2 390 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 SLC6A7Q99884 636 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 PPA2Q9H2U2 334 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 UNKLQ9H9P5 680 aaKnown RBP16.58■□□□□ 0.24
DDX39A-207ENST00000588542 SIRT7Q9NRC8 400 aa16.58■□□□□ 0.24
DDX39A-207ENST00000588542 TRAV24A0A0B4J272 114 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 TRDV1A0A1B0GX56 115 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 TNFAIP8O95379 198 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 CCL3L1P16619 93 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 CALRP27797 417 aaKnown RBP16.57■□□□□ 0.24
DDX39A-207ENST00000588542 ERP29P30040 261 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms