RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 Q8NFD4 153 aa13.16□□□□□ -0.3
RETREG3-206ENST00000588423 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
RETREG3-206ENST00000588423 TNFAIP8L1Q8WVP5 186 aa13.16□□□□□ -0.3
RETREG3-206ENST00000588423 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-206ENST00000588423 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
RETREG3-206ENST00000588423 ZNF184Q99676 751 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-206ENST00000588423 FOXJ3Q9UPW0 622 aa13.16□□□□□ -0.3
RETREG3-206ENST00000588423 SOX21Q9Y651 276 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-206ENST00000588423 PNMA8CA0A1B0GUJ8 204 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 MGST3O14880 152 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 RGS10O43665 173 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 PSPNO60542 156 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 OR2H2O95918 312 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 RBP4P02753 201 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 GABRR1P24046 479 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
RETREG3-206ENST00000588423 DUSP1P28562 367 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 ERP29P30040 261 aaKnown RBP13.15□□□□□ -0.3
RETREG3-206ENST00000588423 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-206ENST00000588423 PTGFRP43088 359 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 EDDM3BP56851 147 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 ZNF273Q14593 569 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 SLC9A3R2Q15599 337 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 GRK1Q15835 563 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
RETREG3-206ENST00000588423 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 SATL1Q86VE3 508 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 CDH26Q8IXH8 852 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 C11orf42Q8N5U0 333 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 MS4A15Q8N5U1 240 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 SGCDQ92629 289 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 DERL3Q96Q80 235 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 OR5M11Q96RB7 305 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
RETREG3-206ENST00000588423 MDFIC2A0A1B0GVS7 189 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 C17orf98A8MV24 154 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 CSN2P05814 226 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
RETREG3-206ENST00000588423 CALCBP10092 127 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 TGFBR2P37173 567 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 OR3A1P47881 315 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 SNU13P55769 128 aaKnown RBP13.14□□□□□ -0.31
RETREG3-206ENST00000588423 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 MED22Q15528 200 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 Q6P435 159 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 TMEM86BQ8N661 226 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 OR4S1Q8NGB4 309 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 SF3B6Q9Y3B4 125 aaKnown RBP13.14□□□□□ -0.31
RETREG3-206ENST00000588423 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
RETREG3-206ENST00000588423 TRAV8-7A0A075B6U6 113 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 hADV38S2A0JD32 116 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 TMEM89A2RUT3 159 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 SIRPB1O00241 398 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 NPFFO15130 113 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 ZNF780AO75290 641 aaPredicted RBP13.13□□□□□ -0.31
RETREG3-206ENST00000588423 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 ZNF44P15621 663 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 CCL3L1P16619 93 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 OR3A4PP47883 348 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 COMPP49747 757 aaPredicted RBP13.13□□□□□ -0.31
RETREG3-206ENST00000588423 DLX6P56179 175 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 KLRD1Q13241 179 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 RSU1Q15404 277 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 MIDNQ504T8 468 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 NHLRC3Q5JS37 347 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 HCP5Q6MZN7 132 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 ORAI1Q96D31 301 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 CHST6Q9GZX3 395 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 METTL9Q9H1A3 318 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 HEXA-AS1Q9H8Q6 139 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 POMT1Q9Y6A1 747 aa13.13□□□□□ -0.31
RETREG3-206ENST00000588423 A0A0G2JK05 382 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 A0A0U1RQK1 487 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-206ENST00000588423 DEGS1O15121 323 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 PIN1P1O15428 100 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 HOXA3O43365 443 aaPredicted RBP13.12□□□□□ -0.31
RETREG3-206ENST00000588423 DENRO43583 198 aaKnown RBP13.12□□□□□ -0.31
RETREG3-206ENST00000588423 MELTFP08582 738 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 FBP1P09467 338 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 DLX1P56177 255 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 P2RX3P56373 397 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 ACTG1P63261 375 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
RETREG3-206ENST00000588423 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms