RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DYRK2Q92630 601 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 POM121Q96HA1 1249 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 NEDD4LQ96PU5 975 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 THAP7Q9BT49 309 aaPredicted RBP9.49□□□□□ -0.89
VMP1-207ENST00000588131 FAAP24Q9BTP7 215 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 RAB1BQ9H0U4 201 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.49□□□□□ -0.89
VMP1-207ENST00000588131 PLEKHJ1Q9NW61 149 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 RASL12Q9NYN1 266 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 NLKQ9UBE8 527 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 OR14J1Q9UGF5 321 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 FBXO9Q9UK97 447 aaPredicted RBP9.49□□□□□ -0.89
VMP1-207ENST00000588131 HSF4Q9ULV5 492 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 ICE1Q9Y2F5 2266 aa9.49□□□□□ -0.89
VMP1-207ENST00000588131 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 UBE2QL1A1L167 161 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 TMEM178BH3BS89 294 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 H7C417 338 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 SIRPB1O00241 398 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 HSPB6O14558 160 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 DEGS1O15121 323 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 OR2H2O95918 312 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 HAND1O96004 215 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 FCER2P06734 321 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 PSG2P11465 335 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 ZNF44P15621 663 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 FUT3P21217 361 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 COL8A2P25067 703 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 MRPS10P82664 201 aaKnown RBP9.48□□□□□ -0.89
VMP1-207ENST00000588131 PNLIPRP3Q17RR3 467 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 SMIM21Q3B7S5 101 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 HACD4Q5VWC8 232 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 TRIQKQ629K1 86 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 FIP1L1Q6UN15 594 aaKnown RBP9.48□□□□□ -0.89
VMP1-207ENST00000588131 DCDC5Q6ZRR9 648 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 LYSMD2Q8IV50 215 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 CD177Q8N6Q3 437 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 SUMF2Q8NBJ7 301 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 C15orf40Q8WUR7 153 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 FCAMRQ8WWV6 532 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 CCL17Q92583 94 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 HPS1Q92902 700 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 PSMG3-AS1Q96PY0 264 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 HDHD3Q9BSH5 251 aaPredicted RBP9.48□□□□□ -0.89
VMP1-207ENST00000588131 IFT22Q9H7X7 185 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 PALMDQ9NP74 551 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 TMEM106BQ9NUM4 274 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 KLK11Q9UBX7 282 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 WIPI2Q9Y4P8 454 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 NPTNQ9Y639 398 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 ROS1P08922 2347 aa9.48□□□□□ -0.89
VMP1-207ENST00000588131 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 FLNCQ14315 2725 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 LINC00854A0A1B0GVQ3 168 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 OOEPA6NGQ2 149 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 RFPL4AA6NLU0 287 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 LRRC30A6NM36 301 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 OR2AT4A6NND4 320 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 SERPINE3A8MV23 424 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 RFPL4AL1F8VTS6 287 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 SULT1C2O00338 296 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 SLC33A1O00400 549 aaPredicted RBP9.47□□□□□ -0.89
VMP1-207ENST00000588131 SH2D1BO14796 132 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 ORC5O43913 435 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 NDUFS7O75251 213 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 RP2O75695 350 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 AMY2BP19961 511 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 GNG2P59768 71 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 COL10A1Q03692 680 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 ARFRP1Q13795 201 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 TEX36Q5VZQ5 186 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 C20orf204Q6ZNR8 217 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 TRAPPC6BQ86SZ2 158 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 BPIFB2Q8N4F0 458 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 DEFB108BQ8NET1 73 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 NEU4Q8WWR8 484 aaPredicted RBP9.47□□□□□ -0.89
VMP1-207ENST00000588131 RDH5Q92781 318 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 DPCDQ9BVM2 203 aaPredicted RBP9.47□□□□□ -0.89
VMP1-207ENST00000588131 SCPEP1Q9HB40 452 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 DNAJB11Q9UBS4 358 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 ZNF222Q9UK12 451 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 PLEKHA6Q9Y2H5 1048 aa9.47□□□□□ -0.89
VMP1-207ENST00000588131 RBMX2Q9Y388 322 aaKnown RBP9.47□□□□□ -0.89
VMP1-207ENST00000588131 PPIAL4EA0A075B759 164 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 A0A1B0GW55 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 TMEM82A0PJX8 343 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PPIAL4DF5H284 164 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 OVOL3O00110 214 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 LGALS8O00214 317 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 PSPNO60542 156 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 CA11O75493 328 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 LPLP06858 475 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.9
VMP1-207ENST00000588131 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms