RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 BOD1Q96IK1 185 aa16.1■□□□□ 0.17
DDX39A-206ENST00000587730 TMEM56Q96MV1 263 aa16.1■□□□□ 0.17
DDX39A-206ENST00000587730 WFDC1Q9HC57 220 aa16.1■□□□□ 0.17
DDX39A-206ENST00000587730 TMEM56-RWDD3S4R434 201 aa16.1■□□□□ 0.17
DDX39A-206ENST00000587730 C3orf85A0A1B0GTC6 90 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 TRDCB7Z8K6 153 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 K7N7A8 449 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 MPPED1O15442 326 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 PPYP01298 95 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 RAB5AP20339 215 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CXCL12P48061 93 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CLDN15P56746 228 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 MLF1P58340 268 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 EWSR1Q01844 656 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX39A-206ENST00000587730 BAXQ07812 192 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 FOXO1Q12778 655 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CLINT1Q14677 625 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 AAED1Q7RTV5 226 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 DPPA2Q7Z7J5 298 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 SAXO1Q8IYX7 474 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 HPSE2Q8WWQ2 592 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 SPSB4Q96A44 273 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CLDN23Q96B33 292 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 GNPNAT1Q96EK6 184 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-206ENST00000587730 ZNF251Q9BRH9 671 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 TMEM222Q9H0R3 208 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 PLEKHF2Q9H8W4 249 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CRLF2Q9HC73 371 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 PARPBPQ9NWS1 579 aa16.09■□□□□ 0.17
DDX39A-206ENST00000587730 RCL1Q9Y2P8 373 aaKnown RBP16.09■□□□□ 0.17
DDX39A-206ENST00000587730 CCDC187A0A096LP49 1063 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 MASP2O00187 686 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 SNRNP70P08621 437 aaKnown RBP16.08■□□□□ 0.17
DDX39A-206ENST00000587730 CTXN2P0C2S0 81 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 ZNF14P17017 642 aaPredicted RBP16.08■□□□□ 0.17
DDX39A-206ENST00000587730 ZNF32P17041 273 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 ID4P47928 161 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 CARD18P57730 90 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 SNRPEP62304 92 aaKnown RBP16.08■□□□□ 0.17
DDX39A-206ENST00000587730 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 C1QL4Q86Z23 238 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 TCEAL3Q969E4 200 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 JSRP1Q96MG2 331 aaPredicted RBP16.08■□□□□ 0.17
DDX39A-206ENST00000587730 PAPOLGQ9BWT3 736 aaKnown RBP16.08■□□□□ 0.17
DDX39A-206ENST00000587730 OR2H1Q9GZK4 316 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 ZNF442Q9H7R0 627 aa16.08■□□□□ 0.17
DDX39A-206ENST00000587730 NKX2-1P43699 371 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-206ENST00000587730 PIGYQ3MUY2 71 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 PLCXD3Q63HM9 321 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 DPPA3Q6W0C5 159 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 FOXB1Q99853 325 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 SRXN1Q9BYN0 137 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 PRDM14Q9GZV8 571 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 HIPK2Q9H2X6 1198 aa16.08■□□□□ 0.16
DDX39A-206ENST00000587730 MRPS18CQ9Y3D5 142 aaKnown RBP16.08■□□□□ 0.16
DDX39A-206ENST00000587730 ASXL3Q9C0F0 2248 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 CLEC18AA5D8T8 446 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 TK1P04183 234 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 UMODP07911 640 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 AADACP22760 399 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 RAB2AP61019 212 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 ABLIM2Q6H8Q1 611 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 SLC35G3Q8N808 338 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 CLEC18CQ8NCF0 446 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 AGBL5Q8NDL9 886 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 OR52M1Q8NGK5 317 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 OR2Y1Q8NGV0 311 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 LILRB1Q8NHL6 650 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-206ENST00000587730 MR1Q95460 341 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 IL22RA2Q969J5 263 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 C11orf1Q9H5F2 150 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 OCIAD1Q9NX40 245 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 CEP192Q8TEP8 1941 aa16.07■□□□□ 0.16
DDX39A-206ENST00000587730 IGKV1-12A0A0C4DH73 117 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 ZNF716A6NP11 495 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 IFNA17P01571 189 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 IGKV1D-12P01611 117 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 P04436 131 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 ACAA1P09110 424 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-206ENST00000587730 VAMP2P63027 116 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 PSG4Q00888 419 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 AKIRIN2Q53H80 203 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 SOHLH1Q5JUK2 328 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 ZNF695Q8IW36 515 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 ZNF565Q8N9K5 539 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 SUMF2Q8NBJ7 301 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 LYRM2Q9NU23 88 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-206ENST00000587730 UBE2J1Q9Y385 318 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-206ENST00000587730 HS3ST3B1Q9Y662 390 aa16.06■□□□□ 0.16
DDX39A-206ENST00000587730 KIR2DS1A0A191URI9 304 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 K7ESF4 209 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 S100GP29377 79 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 KIR2DS4P43632 304 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 SULT1A1P50225 295 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 B3GALT5-AS1P59052 145 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 KIR2DS1Q14954 304 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 OR8G1Q15617 311 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 HSD17B11Q8NBQ5 300 aa16.05■□□□□ 0.16
DDX39A-206ENST00000587730 FAM213BQ8TBF2 198 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms