RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 BDH1Q02338 343 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 ZNF85Q03923 595 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 TP53I3Q53FA7 332 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 OR52W1Q6IF63 320 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 ABHD12Q8N2K0 398 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 ZNF596Q8TC21 504 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 CAPSLQ8WWF8 208 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 RNF166Q96A37 237 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-216ENST00000586813 HMG20AQ9NP66 347 aa15.47■□□□□ 0.07
TRAF4-216ENST00000586813 TRGV10A0A0A0MS01 117 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 ATF1P18846 271 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 PRKACBP22694 351 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 CDK2P24941 298 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 FASP25445 335 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 BRS3P32247 399 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 POLR2IP36954 125 aaKnown RBP15.46■□□□□ 0.07
TRAF4-216ENST00000586813 HEPN1Q6WQI6 88 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 CCDC121Q6ZUS5 278 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 LHFPL2Q6ZUX7 228 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 UTS2BQ765I0 119 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 CENPVQ7Z7K6 275 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-216ENST00000586813 RTN4RL2Q86UN3 420 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 SPSB1Q96BD6 273 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 SLC25A33Q9BSK2 321 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 GABARAPL3Q9BY60 117 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 EXOSC4Q9NPD3 245 aaKnown RBP15.46■□□□□ 0.07
TRAF4-216ENST00000586813 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-216ENST00000586813 GSTK1Q9Y2Q3 226 aa15.46■□□□□ 0.07
TRAF4-216ENST00000586813 TSSC4Q9Y5U2 329 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-216ENST00000586813 TCRBV4S1A1TA0A5B7 111 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 FAM172BPA6NC97 362 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 MPIG6BO95866 241 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 OR2H2O95918 312 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 IGLV1-47P01700 117 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 PF4P02776 101 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 LPLP06858 475 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 ARHGDIBP52566 201 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 PDZK1IP1Q13113 114 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 TMED1Q13445 227 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 ABCA11PQ4W5N1 156 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 AMIGO2Q86SJ2 522 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 OR8J1Q8NGP2 316 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 OR2G2Q8NGZ5 317 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 STMN2Q93045 179 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 RFKQ969G6 155 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 MYDGFQ969H8 173 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 RFT1Q96AA3 541 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 EME1Q96AY2 570 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 OPALINQ96PE5 141 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 TAS2R3Q9NYW6 316 aa15.45■□□□□ 0.06
TRAF4-216ENST00000586813 IGKV1-12A0A0C4DH73 117 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 LEUTXA8MZ59 168 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 SH2D1BO14796 132 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 OR2F2O95006 317 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 IGKV1D-12P01611 117 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 ISG15P05161 165 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 ZNF20P17024 532 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 CD34P28906 385 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 SLC35A2P78381 396 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 AESQ08117 197 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 TMEM244Q5VVB8 128 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 OR4X2Q8NGF9 303 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 CORO2AQ92828 525 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 FGGYQ96C11 551 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 RBM14Q96PK6 669 aaKnown RBP15.44■□□□□ 0.06
TRAF4-216ENST00000586813 MBOAT4Q96T53 435 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 COMMD4Q9H0A8 199 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 RIBC2Q9H4K1 309 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 ZNF286AQ9HBT8 521 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 AP4S1Q9Y587 144 aa15.44■□□□□ 0.06
TRAF4-216ENST00000586813 COL7A1Q02388 2944 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 FUOMA2VDF0 154 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 KDM4BO94953 1096 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 AMY1AP04745 511 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 AMY2AP04746 511 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 LMO1P25800 156 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 GDNFP39905 211 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 CEACAM3P40198 252 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 GLIPR1P48060 266 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 BCAS4Q8TDM0 211 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 FRRS1LQ9P0K9 344 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 PCDHGB5Q9Y5G0 923 aa15.43■□□□□ 0.06
TRAF4-216ENST00000586813 ODAMA1E959 279 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 SH2D7A6NKC9 451 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-216ENST00000586813 BUB1B-PAK6H3BSN5 160 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 K7EIL1 84 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 DYNC1I1O14576 645 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 CSN2P05814 226 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 OCM2P0CE71 109 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 OCMP0CE72 109 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-216ENST00000586813 FCGR1AP12314 374 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 PTGFRP43088 359 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 NANOS3P60323 173 aaKnown RBP15.42■□□□□ 0.06
TRAF4-216ENST00000586813 KPNB1Q14974 876 aaKnown RBP15.42■□□□□ 0.06
TRAF4-216ENST00000586813 HLA-DRB5Q30154 266 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 KHDC1LQ5JSQ8 128 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 TPTE2P1Q5T6R2 138 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 FDX2Q6P4F2 183 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 C10orf99Q6UWK7 81 aa15.42■□□□□ 0.06
TRAF4-216ENST00000586813 OR5D18Q8NGL1 313 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms