RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NOS1APO75052 506 aaPredicted RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 ZNF250P15622 560 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 AMY2BP19961 511 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 BCL3P20749 454 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 PTAFRP25105 342 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 ECI1P42126 302 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 EIF2B2P49770 351 aaKnown RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 ZNF83P51522 516 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 TLE4Q04727 773 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 MAB21L1Q13394 359 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 SIGIRRQ6IA17 410 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 FAHD2BQ6P2I3 314 aaPredicted RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 MEX3BQ6ZN04 569 aaKnown RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 IDO2Q6ZQW0 420 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 TCTE3Q8IZS6 198 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 FAM58AQ8N1B3 248 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 GVQW1Q8N7I0 195 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 BEST4Q8NFU0 473 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 OR4D10Q8NGI6 311 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 OR5H2Q8NGV7 314 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 GIMAP1Q8WWP7 306 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 FAHD2AQ96GK7 314 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 ST6GAL2Q96JF0 529 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 SLC6A7Q99884 636 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 CMSS1Q9BQ75 279 aaKnown RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 ADAT1Q9BUB4 502 aaKnown RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 TINAGL1Q9GZM7 467 aaPredicted RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 FGF23Q9GZV9 251 aaPredicted RBP8.85□□□□□ -0.99
LIG3-203ENST00000585370 IFT22Q9H7X7 185 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 MTCH1Q9NZJ7 389 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 VSTM5A8MXK1 200 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 BOLA2-SMG1P6H3BVE0 249 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 M0QYG6 137 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 GEMIN2O14893 280 aaKnown RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 CREBL2O60519 120 aaPredicted RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 IGHV3-13P01766 116 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 RLN1P04808 185 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 IGFBP2P18065 325 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 CALCRP30988 508 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 HRH1P35367 487 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 MPV17P39210 176 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 HCFC1P51610 2035 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 SNU13P55769 128 aaKnown RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 RIPPLY3P57055 190 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 TSPAN5P62079 268 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 TFF3Q07654 80 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 RBM39Q14498 530 aaKnown RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 CHRFAM7AQ494W8 412 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 FAAP20Q6NZ36 180 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 FIP1L1Q6UN15 594 aaKnown RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 TMEM108Q6UXF1 575 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 SLC36A1Q7Z2H8 476 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 OR4S1Q8NGB4 309 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 OR10AD1Q8NGE0 317 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 OR5AP2Q8NGF4 316 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 LILRB4Q8NHJ6 448 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 TERB2Q8NHR7 220 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 SNAPC3Q92966 411 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 SLAMF9Q96A28 289 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 DACT3Q96B18 629 aaPredicted RBP8.84□□□□□ -0.99
LIG3-203ENST00000585370 LRRC46Q96FV0 321 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 FAAP24Q9BTP7 215 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 ST6GALNAC5Q9BVH7 336 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 COQ3Q9NZJ6 369 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 GLS2Q9UI32 602 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 FLVCR2Q9UPI3 526 aa8.84□□□□□ -0.99
LIG3-203ENST00000585370 TMEM82A0PJX8 343 aa8.83□□□□□ -1
LIG3-203ENST00000585370 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
LIG3-203ENST00000585370 CEACAM18A8MTB9 384 aa8.83□□□□□ -1
LIG3-203ENST00000585370 MCRIP1C9JLW8 97 aa8.83□□□□□ -1
LIG3-203ENST00000585370 H7C1Q1 480 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SYNGR1O43759 233 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SSNA1O43805 119 aa8.83□□□□□ -1
LIG3-203ENST00000585370 LILRA1O75019 489 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SNAPC5O75971 98 aa8.83□□□□□ -1
LIG3-203ENST00000585370 OR7C1O76099 320 aaPredicted RBP8.83□□□□□ -1
LIG3-203ENST00000585370 CD40P25942 277 aa8.83□□□□□ -1
LIG3-203ENST00000585370 NPBWR2P48146 333 aa8.83□□□□□ -1
LIG3-203ENST00000585370 FABP6P51161 128 aa8.83□□□□□ -1
LIG3-203ENST00000585370 TAS2R31P59538 309 aa8.83□□□□□ -1
LIG3-203ENST00000585370 UBE2MP61081 183 aaKnown RBP8.83□□□□□ -1
LIG3-203ENST00000585370 ERVS71-1P61550 626 aa8.83□□□□□ -1
LIG3-203ENST00000585370 NKX6-1P78426 367 aaPredicted RBP8.83□□□□□ -1
LIG3-203ENST00000585370 CBX3Q13185 183 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SURF2Q15527 256 aaPredicted RBP8.83□□□□□ -1
LIG3-203ENST00000585370 MICBQ29980 383 aa8.83□□□□□ -1
LIG3-203ENST00000585370 PIGYQ3MUY2 71 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
LIG3-203ENST00000585370 ATAD3CQ5T2N8 411 aa8.83□□□□□ -1
LIG3-203ENST00000585370 ZNF626Q68DY1 528 aa8.83□□□□□ -1
LIG3-203ENST00000585370 OR52W1Q6IF63 320 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SPNS3Q6ZMD2 512 aa8.83□□□□□ -1
LIG3-203ENST00000585370 Q6ZS49 121 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SPICQ8N5J4 248 aa8.83□□□□□ -1
LIG3-203ENST00000585370 SCCPDHQ8NBX0 429 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms