RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 ZNF16P17020 682 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 TMBIM6P55061 237 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 CAV3P56539 151 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 VBP1P61758 197 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SFXN4Q6P4A7 337 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 USP43Q70EL4 1123 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 H1FXQ92522 213 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM46BQ96A09 425 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SLC25A28Q96A46 364 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 MSI2Q96DH6 328 aaKnown RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SNX22Q96L94 193 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 C1orf147Q96MC9 270 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 BANF2Q9H503 90 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 LIN7BQ9HAP6 207 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 DAPK2Q9UIK4 370 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 MAB21L2Q9Y586 359 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A1B0GW55 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 FUOMA2VDF0 154 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 K7N7A8 449 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 CD5LO43866 347 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 TFF1P04155 84 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 TK1P04183 234 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 AMY2BP19961 511 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 GATA3P23771 443 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 CLDN12P56749 244 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 NCS1P62166 190 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 PAN3Q58A45 887 aaKnown RBP12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4L9Q6RFH8 374 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 BTNL3Q6UXE8 466 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 ZNF841Q6ZN19 808 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 GDPD3Q7L5L3 318 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 OR8H2Q8N162 312 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 TMEM104Q8NE00 496 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 OR51D1Q8NGF3 324 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 FBLN5Q9UBX5 448 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
SCAMP4-209ENST00000585335 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 PPIAL4CA0A0B4J2A2 164 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A0G2JK05 382 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A0G2JMP0 313 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A0X1KG70 313 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A1W2PP11 408 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 TMEM14DPA8MWL7 114 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 KIAA1324LA8MWY0 1029 aaPredicted RBP12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 MGST3O14880 152 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 SELLP14151 372 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 LMO1P25800 156 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 KCNJ3P48549 501 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 SCAND1P57086 179 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 GRK1Q15835 563 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 TAF9Q16594 264 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 CTF1Q16619 201 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 DCAF12L2Q5VW00 463 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 NR2C2APQ86WQ0 139 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 OR4M2Q8NGB6 313 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 Q96M66 194 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 HIF1ANQ9NWT6 349 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 LPAR3Q9UBY5 353 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 RAB22AQ9UL26 194 aa12.11□□□□□ -0.47
SCAMP4-209ENST00000585335 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A1W2PPH5 198 aa12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 A0A1W2PQ09 198 aa12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 ZNF737O75373 536 aa12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 LIPFP07098 398 aa12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 ZFP36P26651 326 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 TGFBR1P36897 503 aa12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 RPS19P39019 145 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
SCAMP4-209ENST00000585335 OR10K2Q6IF99 312 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms