RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 AAED1Q7RTV5 226 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 KCNE4Q8WWG9 221 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 FOXB1Q99853 325 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 OR2H1Q9GZK4 316 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 RPS10P5Q9NQ39 176 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 SLC7A11Q9UPY5 501 aa12.28□□□□□ -0.44
CDK5RAP3-237ENST00000585163 CCDC85CA6NKD9 419 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PMELP40967 661 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 AKR1C3P42330 323 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GLP1RP43220 463 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RBM11P57052 281 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NHLH2Q02577 135 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 AKIRIN2Q53H80 203 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 BEND4Q6ZU67 534 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CCDC71LQ8N9Z2 235 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 HIST1H2BAQ96A08 127 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SGCZQ96LD1 299 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 WNT5BQ9H1J7 359 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C19orf12Q9NSK7 152 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GLAP06280 429 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 AADACP22760 399 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PTAFRP25105 342 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MEOX2P50222 304 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RNF212Q495C1 297 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 AWAT1Q58HT5 328 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR4D5Q8NGN0 318 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TP53RKQ96S44 253 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SH3BGRL3Q9H299 93 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TUBA4BQ9H853 241 aa12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 STRAPQ9Y3F4 350 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-237ENST00000585163 A0A0G2JMM0 328 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 A0A1W2PPB8 328 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 A0A1W2PRS3 328 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 KIR3DP1A8MWS1 328 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C1QL1O75973 258 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CCL4P13236 92 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FUT3P21217 361 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RGS19P49795 217 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 HERV-K104P61576 105 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 DAZAP2Q15038 168 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PDCD1Q15116 288 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CEACAM16Q2WEN9 425 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RIPPLY2Q5TAB7 128 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PLCXD3Q63HM9 321 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR14L1PQ8NHC6 308 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TECTBQ96PL2 329 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EIF5A2Q9GZV4 153 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PLSCR2Q9NRY7 297 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 RCL1Q9Y2P8 373 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF816-ZNF321PA0A0X1KG74 233 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C7orf77A4D0Y5 90 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PPYP01298 95 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PRH1P02810 166 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MT-ND4LP03901 98 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PCBD1P61457 104 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ABLIM2Q6H8Q1 611 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PIGCQ92535 297 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF442Q9H7R0 627 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 PILRBQ9UKJ0 227 aa12.26□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MPPED1O15442 326 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CXCL13O43927 109 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GNMTQ14749 295 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 BOD1Q96IK1 185 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 IP6K3Q96PC2 410 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SPACA1Q9HBV2 294 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C3orf85A0A1B0GTC6 90 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C1orf196B1AJZ1 125 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 CDS2O95674 445 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 P04436 131 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SNRNP70P08621 437 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF44P15621 663 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SNRPEP62304 92 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TRIM61Q5EBN2 209 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF611Q8N823 705 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SPSB4Q96A44 273 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TAAR9Q96RI9 348 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TMEM222Q9H0R3 208 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 C11orf1Q9H5F2 150 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 P4HTMQ9NXG6 502 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 TINAGQ9UJW2 476 aa12.25□□□□□ -0.45
CDK5RAP3-237ENST00000585163 NCKAP5O14513 1909 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 ZNF587BE7ETH6 402 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR7C1O76099 320 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EDN3P14138 238 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 SRPXP78539 464 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 EWSR1Q01844 656 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 MEX3BQ6ZN04 569 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 Q8NFD4 153 aa12.24□□□□□ -0.45
CDK5RAP3-237ENST00000585163 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms