RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LCN1P1Q5VSP4 162 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ERI1Q8IV48 349 aaKnown RBP14.4□□□□□ -0.1
TOP3A-220ENST00000585031 CSNK2A3Q8NEV1 391 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 PIGCQ92535 297 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 FOXRED1Q96CU9 486 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-220ENST00000585031 YIPF6Q96EC8 236 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF488Q96MN9 340 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 FUNDC2Q9BWH2 189 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 OR51I2Q9H344 312 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ENPP5Q9UJA9 477 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 CST4P01036 141 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 AMY1AP04745 511 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 AMY2AP04746 511 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 ALDOBP05062 364 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 LPLP06858 475 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 CLUP10909 449 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 CRMP1Q14194 572 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 KHDC1LQ5JSQ8 128 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 OR11H6Q8NGC7 330 aa14.39□□□□□ -0.11
TOP3A-220ENST00000585031 ZMAT5Q9UDW3 170 aaKnown RBP14.39□□□□□ -0.11
TOP3A-220ENST00000585031 EXOGQ9Y2C4 368 aaKnown RBP14.39□□□□□ -0.11
TOP3A-220ENST00000585031 FAM183AA6NL82 134 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 H3BMQ9 156 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 THBS3P49746 956 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 RPS7P62081 194 aaKnown RBP14.38□□□□□ -0.11
TOP3A-220ENST00000585031 MED22Q15528 200 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 TEX30Q5JUR7 227 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 ACP7Q6ZNF0 438 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 SLC37A3Q8NCC5 494 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 PRR25Q96S07 402 aa14.38□□□□□ -0.11
TOP3A-220ENST00000585031 ZNF732B4DXR9 585 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 GABARAPO95166 117 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 CD36P16671 472 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 GRB2P62993 217 aaKnown RBP14.37□□□□□ -0.11
TOP3A-220ENST00000585031 DGCR2P98153 550 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 SPHARQ15513 63 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 TIMM50Q3ZCQ8 353 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 ABCA11PQ4W5N1 156 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 SLC35D3Q5M8T2 416 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 NANOGP1Q8N7R0 232 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 BBS1Q8NFJ9 593 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 OR2T4Q8NH00 348 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 RNF133Q8WVZ7 376 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 AQP3Q92482 292 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 MGLLQ99685 303 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 ZNF649Q9BS31 505 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 MCRIP2Q9BUT9 160 aaKnown RBP14.37□□□□□ -0.11
TOP3A-220ENST00000585031 JAM3Q9BX67 310 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 NMNAT2Q9BZQ4 307 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 OR51V1Q9H2C8 321 aa14.37□□□□□ -0.11
TOP3A-220ENST00000585031 SLC22A1O15245 554 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 HSMCR30P0CW71 290 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 LYL1P12980 280 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 PRDX2P32119 198 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 WNT4P56705 351 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 ACTC1P68032 377 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 ACTA1P68133 377 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 EIF2B1Q14232 305 aaKnown RBP14.36□□□□□ -0.11
TOP3A-220ENST00000585031 CEP78Q5JTW2 689 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 UNQ9370/PRO34162Q6UXP9 181 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 CALHM1Q8IU99 346 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 TIGD4Q8IY51 512 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 OR4X2Q8NGF9 303 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 OR52H1Q8NGJ2 320 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 PGAM5Q96HS1 289 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-220ENST00000585031 ABHD6Q9BV23 337 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 NAA50Q9GZZ1 169 aaKnown RBP14.36□□□□□ -0.11
TOP3A-220ENST00000585031 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 MED20Q9H944 212 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 ISYNA1Q9NPH2 558 aa14.36□□□□□ -0.11
TOP3A-220ENST00000585031 LSM2Q9Y333 95 aaKnown RBP14.36□□□□□ -0.11
TOP3A-220ENST00000585031 CCRL2O00421 344 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 IGHA1P01876 353 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 SLC2A5P22732 501 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 CFL1P23528 166 aaKnown RBP14.35□□□□□ -0.11
TOP3A-220ENST00000585031 HSD11B1P28845 292 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 OPRL1P41146 370 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 MLLT11Q13015 90 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-220ENST00000585031 DYNC1I2Q13409 638 aaKnown RBP14.35□□□□□ -0.11
TOP3A-220ENST00000585031 LINC01590Q5TEZ4 76 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 TMPRSS11AQ6ZMR5 421 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 BATF2Q8N1L9 274 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 ZNF561Q8N587 486 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 ACBD7Q8N6N7 88 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 OR13D1Q8NGV5 346 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 MRPL48Q96GC5 212 aaKnown RBP14.35□□□□□ -0.11
TOP3A-220ENST00000585031 OR8B4Q96RC9 309 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 P2RX4Q99571 388 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 TEAD3Q99594 435 aa14.35□□□□□ -0.11
TOP3A-220ENST00000585031 hCG_1809904A0A1W2PP81 198 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 A0A1W2PPE2 198 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 A0A1W2PPH5 198 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 A0A1W2PR64 198 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 A0A1W2PRV1 198 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 CCDC182A6NF36 153 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 RAMP3O60896 148 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms