RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 BTN2A1Q7KYR7 527 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 C1QL2Q7Z5L3 287 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 LINC00596Q86U02 117 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 KCNG3Q8TAE7 436 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 FAM46BQ96A09 425 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 SELENOIQ9C0D9 397 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 FAM234AQ9H0X4 552 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 CTSZQ9UBR2 303 aa11.53□□□□□ -0.56
TRAF4-215ENST00000584944 TRIM64CA6NLI5 447 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 SLC17A2O00624 439 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 BPNT1O95861 308 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 MPIG6BO95866 241 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 LIPFP07098 398 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 MGMTP16455 207 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 CAV3P56539 151 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
TRAF4-215ENST00000584944 LSM3P62310 102 aaKnown RBP11.52□□□□□ -0.57
TRAF4-215ENST00000584944 BLMHQ13867 455 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 EDDM3AQ14507 147 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 ZNF146Q15072 292 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 FAM189A2Q15884 450 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 PAN3Q58A45 887 aaKnown RBP11.52□□□□□ -0.57
TRAF4-215ENST00000584944 C1orf100Q5SVJ3 147 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 HES5Q5TA89 166 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 ASCL4Q6XD76 172 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.57
TRAF4-215ENST00000584944 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 SHARPINQ9H0F6 387 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 SPACA1Q9HBV2 294 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 ONECUT1Q9UBC0 465 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 STEAP1Q9UHE8 339 aa11.52□□□□□ -0.57
TRAF4-215ENST00000584944 hCG_1809904A0A1W2PP81 198 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 A0A1W2PR64 198 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 A0A1W2PRV1 198 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 A8MXK9 166 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 J3QLI3 93 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 HSPB6O14558 160 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 SLC22A1O15245 554 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 OR2H2O95918 312 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 TK1P04183 234 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
TRAF4-215ENST00000584944 SDC2P34741 201 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
TRAF4-215ENST00000584944 RPL5P46777 297 aaKnown RBP11.51□□□□□ -0.57
TRAF4-215ENST00000584944 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 METTL11BQ5VVY1 283 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 GPR107Q5VW38 600 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 TRAPPC6BQ86SZ2 158 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 OR8H2Q8N162 312 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 YIPF6Q96EC8 236 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 SNX22Q96L94 193 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 URM1Q9BTM9 101 aaKnown RBP11.51□□□□□ -0.57
TRAF4-215ENST00000584944 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 TMEM59Q9BXS4 323 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 BEX2Q9BXY8 128 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 CHST6Q9GZX3 395 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 BANF2Q9H503 90 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 C7orf69Q9H7B7 122 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 ZNF222Q9UK12 451 aa11.51□□□□□ -0.57
TRAF4-215ENST00000584944 YLPM1P49750 1951 aaKnown RBP11.5□□□□□ -0.57
TRAF4-215ENST00000584944 TRBV23-1A0A0A0MS06 115 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 PPIAL4CA0A0B4J2A2 164 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 IGHV2-70DA0A0C4DH43 119 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 A0A1B0GW55 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 SMIM30A4D0T7 59 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 IFITM5A6NNB3 132 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 NOTOA8MTQ0 251 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 K7N7A8 449 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L2P0CJ85 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L3P0CJ86 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L4P0CJ87 422 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L5P0CJ88 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L6P0CJ89 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L7P0CJ90 424 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 SELLP14151 372 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 OR10A3P58181 314 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
TRAF4-215ENST00000584944 SCGB2A2Q13296 93 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 RBM39Q14498 530 aaKnown RBP11.5□□□□□ -0.57
TRAF4-215ENST00000584944 MPV17LQ2QL34 196 aa11.5□□□□□ -0.57
TRAF4-215ENST00000584944 DUX4L9Q6RFH8 374 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-215ENST00000584944 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms