RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CHST6	Q9GZX3	395 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	VCX	Q9H320	206 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	RHOF	Q9HBH0	211 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	PLCXD1	Q9NUJ7	323 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	FKBP14	Q9NWM8	211 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	TAS2R4	Q9NYW5	299 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	C1RL	Q9NZP8	487 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	PSORS1C1	Q9UIG5	152 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	SF3B6	Q9Y3B4	125 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	TRRAP	Q9Y4A5	3859 aa		10.84	□□□□□ -0.67
SREBF1-223	ENST00000584760	hCG_1809904	A0A1W2PP81	198 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760		A0A1W2PPE2	198 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760		A0A1W2PR64	198 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760		A0A1W2PRV1	198 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	MEX3A	A1L020	520 aa	Known RBP	10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	GABRP	O00591	440 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	GPR137B	O60478	399 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR2H2	O95918	312 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	PAH	P00439	452 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	CD2	P06729	351 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF728	P0DKX0	622 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	RAB3A	P20336	220 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	GABRR1	P24046	479 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	SLC34A1	Q06495	639 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	SRSF4	Q08170	494 aa	Known RBP	10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	MED21	Q13503	144 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	DOC2B	Q14184	412 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	GRK1	Q15835	563 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	AHSA2	Q719I0	299 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	BEND2	Q8NDZ0	799 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR13C5	Q8NGS8	318 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	C17orf50	Q8WW18	174 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	NRG4	Q8WWG1	115 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	CPNE2	Q96FN4	548 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	PGLYRP3	Q96LB9	341 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	DPAGT1	Q9H3H5	408 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	EXOSC4	Q9NPD3	245 aa	Known RBP	10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	VPREB3	Q9UKI3	123 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	GSTK1	Q9Y2Q3	226 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF281	Q9Y2X9	895 aa		10.83	□□□□□ -0.68
SREBF1-223	ENST00000584760	TRBV5-5	A0A0J9YX44	114 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	SIRPB1	O00241	398 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	MGST3	O14880	152 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	NDUFA7	O95182	113 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	TMEM225B	P0DP42	221 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	COX7A1	P24310	79 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	LMO1	P25800	156 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	C21orf33	P30042	268 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	BMX	P51813	675 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	RAG2	P55895	527 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	RPS11	P62280	158 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	MEF2C	Q06413	473 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	TPRX1	Q8N7U7	411 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZFP41	Q8N8Y5	198 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	PXT1	Q8NFP0	134 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	GHSR	Q92847	366 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF714	Q96N38	554 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	HEXA-AS1	Q9H8Q6	139 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	CHCHD3	Q9NX63	227 aa	Known RBP	10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	GLS2	Q9UI32	602 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	MMP24	Q9Y5R2	645 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	LINC00312	Q9Y6C7	94 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	VWF	P04275	2813 aa		10.82	□□□□□ -0.68
SREBF1-223	ENST00000584760	hADV38S2	A0JD32	116 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	SH2D1B	O14796	132 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	ALDOB	P05062	364 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	IGHV1-8	P0DP01	117 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	ERP29	P30040	261 aa	Known RBP	10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	MTNR1B	P49286	362 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	AQP4	P55087	323 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	P2RX3	P56373	397 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	YIF1B	Q5BJH7	314 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	ELP2	Q6IA86	826 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760		Q6P435	159 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760		Q8NFD4	153 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	BPIFB6	Q8NFQ5	453 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR4F5	Q8NH21	305 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	PPP1R35	Q8TAP8	253 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	TNFAIP8L1	Q8WVP5	186 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	NKX3-1	Q99801	234 aa	Predicted RBP	10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	PPA2	Q9H2U2	334 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	PCDHGB5	Q9Y5G0	923 aa		10.81	□□□□□ -0.68
SREBF1-223	ENST00000584760	BTBD17	A6NE02	478 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	ERICH4	A6NGS2	130 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	ODF3B	A8MYP8	253 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760		H0YJX3	145 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	SLC33A1	O00400	549 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	MYL12B	O14950	172 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	MAGEB3	O15480	346 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	CLPX	O76031	633 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	CRYBA1	P05813	215 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	CSN2	P05814	226 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF44	P15621	663 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	IGFBP3	P17936	291 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	FST	P19883	344 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR3A4P	P47883	348 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	WNT4	P56705	351 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	TAS2R43	P59537	309 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	PPP3R1	P63098	170 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms