RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	SULT4A1	Q9BR01	284 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	TMEM204	Q9BSN7	226 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	SCPEP1	Q9HB40	452 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	C1orf123	Q9NWV4	160 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	NKIRAS2	Q9NYR9	191 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	RNF115	Q9Y4L5	304 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	CACNG2	Q9Y698	323 aa		4.93	□□□□□ -1.62
MSI2-219	ENST00000584476	ACACB	O00763	2458 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	BOD1L1	Q8NFC6	3051 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	COL6A6	A6NMZ7	2263 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	IGKV1D-8	A0A087WSZ0	117 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	TRAV20	A0A0B4J274	112 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	hCG_1807616	A0A1W2PRN6	198 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	UBE2QL1	A1L167	161 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	SULT1C2	O00338	296 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	LYRM1	O43325	122 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PDCD6	O75340	191 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	RBBP9	O75884	186 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PTTG1	O95997	202 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	TFF1	P04155	84 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ACAA1	P09110	424 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	KIR2DL3	P43628	341 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	CEBPD	P49716	269 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	SELENOV	P59797	346 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	TNFAIP6	P98066	277 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	MZT1	Q08AG7	82 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ARFRP1	Q13795	201 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PNLIPRP3	Q17RR3	467 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PCGF3	Q3KNV8	242 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	NHLRC3	Q5JS37	347 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ATAD3C	Q5T2N8	411 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	HACD4	Q5VWC8	232 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476		Q6P435	159 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	MOGAT3	Q86VF5	341 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	TGIF2LY	Q8IUE0	185 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	BOLL	Q8N9W6	283 aa	Known RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	POC1A	Q8NBT0	407 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	OR4S1	Q8NGB4	309 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	OR4D10	Q8NGI6	311 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	LRRC29	Q8WV35	223 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	MAFIP	Q8WZ33	124 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	EMG1	Q92979	244 aa	Known RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	FBXW5	Q969U6	566 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	FAAP24	Q9BTP7	215 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	WDR13	Q9H1Z4	485 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	MMP28	Q9H239	520 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	HES4	Q9HCC6	221 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	HRASLS	Q9HDD0	168 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PCDHB16	Q9NRJ7	776 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	PLEKHJ1	Q9NW61	149 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	CISD1	Q9NZ45	108 aa	Known RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	NLK	Q9UBE8	527 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	AK3	Q9UIJ7	227 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	HSF4	Q9ULV5	492 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	POLDIP2	Q9Y2S7	368 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	CACNA1B	Q00975	2339 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	ZZEF1	O43149	2961 aa		4.92	□□□□□ -1.62
MSI2-219	ENST00000584476	SPTA1	P02549	2419 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	USP24	Q9UPU5	2620 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	TRAV24	A0A0B4J272	114 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476		A0A1W2PPR1	153 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	C17orf100	A8MU93	164 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	SERPINE3	A8MV23	424 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	VSTM5	A8MXK1	200 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476		M0QYG6	137 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476		M0R233	179 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	HSPB6	O14558	160 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	HS3ST1	O14792	307 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	NOS1AP	O75052	506 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	OR7C1	O76099	320 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	NXPH2	O95156	264 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ECD	O95905	644 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	CD3D	P04234	171 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ADH4	P08319	380 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	GSTT2B	P0CG30	244 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	IGFBP2	P18065	325 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	NAT1	P18440	290 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	FUT3	P21217	361 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	GIF	P27352	417 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	HLA-DMA	P28067	261 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	APOBEC3A	P31941	199 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	RCVRN	P35243	200 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	CCR6	P51684	374 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	AP3S2	P59780	193 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ACTB	P60709	375 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ACTG1	P63261	375 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	CCL8	P80075	99 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	SSBP1	Q04837	148 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	DYRK1A	Q13627	763 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	EFNB3	Q15768	340 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	ZNF672	Q499Z4	452 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	PLA1A	Q53H76	456 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	OR52W1	Q6IF63	320 aa		4.91	□□□□□ -1.62
MSI2-219	ENST00000584476	MZT2B	Q6NZ67	158 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms