RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TMEM251Q8N6I4 163 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 BMI1P35226 326 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 UBE2L3P68036 154 aaKnown RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 HLA-BQ31612 363 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 MOB3BQ86TA1 216 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 OR8B12Q8NGG6 310 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 OR1L6Q8NGR2 347 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 OR13G1Q8NGZ3 307 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 CXCL10P02778 98 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 CD1AP06126 327 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 PABPC1L2AQ5JQF8 200 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 COL5A1-AS1Q5SY13 56 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 LYG1Q8N1E2 194 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 EIF4E3Q8N5X7 224 aaKnown RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 BLNKQ8WV28 456 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 PTX4Q96A99 478 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 NRIP2Q9BQI9 281 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 CCL27Q9Y4X3 112 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 PCDHGA9Q9Y5G4 932 aaKnown RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 SHROOM3Q8TF72 1996 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 MPV17LQ2QL34 196 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
RNF43-208ENST00000584437 MYOZ1Q9NP98 299 aaPredicted RBP11.55□□□□□ -0.56
RNF43-208ENST00000584437 SHISA8B8ZZ34 492 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 GEMIN2O14893 280 aaKnown RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 FAM3BP58499 235 aaPredicted RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 COL19A1Q14993 1142 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 OR4S2Q8NH73 311 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 ASB10Q8WXI3 467 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 MRPL24Q96A35 216 aaKnown RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 ATG101Q9BSB4 218 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 SOCS1O15524 211 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 CA6P23280 308 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 CCR2P41597 374 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 MRGPRX3Q96LB0 322 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 LOXL2Q9Y4K0 774 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 COL16A1Q07092 1604 aaPredicted RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 LYPD8Q6UX82 237 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 MISP3Q96FF7 219 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 LRRC61Q9BV99 259 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 GHITMQ9H3K2 345 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 IL36GQ9NZH8 169 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 COL22A1Q8NFW1 1626 aaPredicted RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 NMBP08949 121 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 HOXC4P09017 264 aaPredicted RBP11.54□□□□□ -0.56
RNF43-208ENST00000584437 MESTQ5EB52 335 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 CARFQ8N187 725 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 SRD5A3Q9H8P0 318 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 PAFAH1B2P68402 229 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 HSPB8Q9UJY1 196 aa11.54□□□□□ -0.56
RNF43-208ENST00000584437 CTXND1A0A1B0GTU2 59 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 A0A1W2PQD3 144 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 PPYP01298 95 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 PRSS1P07477 247 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 HOXA6P31267 233 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 B2MP61769 119 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 A0A1B0GU03 582 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 PPP1CAP62136 330 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.569e-6■□□□□ 8.7
RNF43-208ENST00000584437 RIGQ13278 110 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 OR1C1Q15619 314 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 WIPI1Q5MNZ9 446 aaPredicted RBP11.53□□□□□ -0.56
RNF43-208ENST00000584437 TMEM211Q6ICI0 200 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 VN1R4Q7Z5H5 301 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 ATG4DQ86TL0 474 aaPredicted RBP11.53□□□□□ -0.56
RNF43-208ENST00000584437 OR2Z1Q8NG97 314 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 OR4D11Q8NGI4 311 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 GAL3ST2Q9H3Q3 398 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 IGSF23A1L1A6 192 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
RNF43-208ENST00000584437 Q56UQ5 140 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 CA10Q9NS85 328 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 IL17BQ9UHF5 180 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 YBX1P67809 324 aaKnown RBP11.53□□□□□ -0.56
RNF43-208ENST00000584437 RFESDQ8TAC1 157 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 ALG14Q96F25 216 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 LPAR5Q9H1C0 372 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 ZNF576Q9H609 170 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 OR6C3Q9NZP0 311 aa11.53□□□□□ -0.56
RNF43-208ENST00000584437 MPZL1O95297 269 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 OR3A1P47881 315 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 H1FOOQ8IZA3 346 aaPredicted RBP11.52□□□□□ -0.56
RNF43-208ENST00000584437 TMEM116Q8NCL8 245 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 EID2BQ96D98 161 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 ZNF880Q6PDB4 577 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 MARVELD3Q96A59 401 aa11.52□□□□□ -0.56
RNF43-208ENST00000584437 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms