RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	RAB27B	O00194	218 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZNF432	O94892	652 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	H2BFM	P0C1H6	154 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RAB31	Q13636	194 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	IL11RA	Q14626	422 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ANGPTL5	Q86XS5	388 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	LDLRAD3	Q86YD5	345 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	HSD17B11	Q8NBQ5	300 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	OR51E1	Q8TCB6	317 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	POM121L2	Q96KW2	1035 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TLNRD1	Q9H1K6	362 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MS4A18	H0YCH9	400 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SULT2B1	O00204	365 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SOCS1	O15524	211 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NPIPB7	O75200	414 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	AQP8	O94778	261 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	UBB	P0CG47	229 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PGC	P20142	388 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	DUSP3	P51452	185 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RPS27A	P62979	156 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	UBA52	P62987	128 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SRSF2	Q01130	221 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RBM39	Q14498	530 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MS4A18	Q3C1V0	323 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	AWAT2	Q6E213	333 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	HAGHL	Q6PII5	290 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	LYG2	Q86SG7	212 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	KCNRG	Q8N5I3	272 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	EIF4E3	Q8N5X7	224 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TMEM229B	Q8NBD8	167 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	OR51F2	Q8NH61	342 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NEIL1	Q96FI4	390 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PGAM5	Q96HS1	289 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ST6GALNAC5	Q9BVH7	336 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RAB18	Q9NP72	206 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ACKR4	Q9NPB9	350 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	G6PC2	Q9NQR9	355 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZDHHC8	Q9ULC8	765 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A0A1B0GV50	99 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	C5orf63	A6NC05	138 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	BCL2L11	O43521	198 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	EFNA2	O43921	213 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	VSIG8	P0DPA2	414 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	CALCR	P30988	508 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PTTG1IP	P53801	180 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PKIA	P61925	76 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RPL19	P84098	196 aa	Known RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	FOXF1	Q12946	379 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MFAP5	Q13361	173 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PLAC9	Q5JTB6	97 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	OR13D1	Q8NGV5	346 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SLC25A32	Q9H2D1	315 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TXNIP	Q9H3M7	391 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	POLR1D	Q9Y2S0	133 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	IFNA5	P01569	189 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	HOXB5	P09067	269 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZBTB25	P24278	435 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	GPR12	P47775	334 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NPBWR1	P48145	328 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	POLR2H	P52434	150 aa	Known RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	S100A10	P60903	97 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RBPJ	Q06330	500 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MOB3C	Q70IA8	216 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ANKRD37	Q7Z713	158 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PIGQ	Q9BRB3	760 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SMIM3	Q9BZL3	60 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PRO1933	Q9H354	126 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	C1orf198	Q9H425	327 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZNF701	Q9NV72	531 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RBM7	Q9Y580	266 aa	Known RBP	10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	B3GALT1	Q9Y5Z6	326 aa		10.13	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	CACNA1G	O43497	2377 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A0A0D9SG52	128 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A0A1W2PNR3	127 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A0A1W2PRX2	142 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZNF814	B7Z6K7	855 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NPIPA5	E9PKD4	350 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		H0YIZ8	118 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SYT7	O43581	403 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RAMP1	O60894	148 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	DXO	O77932	396 aa	Known RBP	10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	KNG1	P01042	644 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	CELA2A	P08217	269 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	BID	P55957	195 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	UBE2K	P61086	200 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TLE4	Q04727	773 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	EMC4	Q5J8M3	183 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ASCL4	Q6XD76	172 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ACOT7L	Q6ZUV0	252 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NUBPL	Q8TB37	319 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TMEM234	Q8WY98	164 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	OR5AC2	Q9NZP5	309 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NPIPA1	Q9UND3	350 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	NCOA6	Q14686	2063 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A0A1B0GTI1	187 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A6NNC1	897 aa		10.12	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		A8MVM7	634 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms