RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ZNF44P15621 663 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 CCL3L1P16619 93 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 EEF1B2P24534 225 aaKnown RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 OR3A4PP47883 348 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 BDH1Q02338 343 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 SCN1BQ07699 218 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 METAP1DQ6UB28 335 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 C17orf107Q6ZR85 190 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 C1orf122Q6ZSJ8 110 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 OR5D13Q8NGL4 314 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 SPATA3Q8NHX4 192 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 PPP1R35Q8TAP8 253 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 NR1H4Q96RI1 486 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 DUSP21Q9H596 190 aa10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 SEBOXQ9HB31 216 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-218ENST00000582955 TRAV8-7A0A075B6U6 113 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 TRBV5-7A0A0A0MS05 114 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A0U1RQK1 487 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 hCG_1809904A0A1W2PP81 198 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A1W2PPE2 198 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A1W2PR64 198 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 A0A1W2PRV1 198 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 PSPNO60542 156 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 OR2H2O95918 312 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 CD1AP06126 327 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 IGFBP3P17936 291 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 FSTP19883 344 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 PRTN3P24158 256 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 CRHBPP24387 322 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 TGFBR2P37173 567 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 MTNR1BP49286 362 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 ACSM1Q08AH1 577 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF273Q14593 569 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 RSU1Q15404 277 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 TPRX1Q8N7U7 411 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 PXT1Q8NFP0 134 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 OR4S1Q8NGB4 309 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 FAM216AQ8WUB2 273 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 DERL3Q96Q80 235 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 S100A13Q99584 98 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF184Q99676 751 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 TMED9Q9BVK6 235 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 TNFRSF19Q9NS68 423 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 BLOC1S6Q9UL45 172 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 ING4Q9UNL4 249 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 LSM2Q9Y333 95 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 RRP15Q9Y3B9 282 aaKnown RBP10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 FAM96BQ9Y3D0 163 aa10.33□□□□□ -0.76
SMARCE1-218ENST00000582955 MAGEA13PA6NCF6 341 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 MGST3O14880 152 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 DEGS1O15121 323 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 NPFFO15130 113 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 CDRT1O95170 752 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 HTR3BO95264 441 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 MAS1P04201 325 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 HSMCR30P0CW71 290 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 MAPK3P27361 379 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 PTGFRP43088 359 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 OR3A1P47881 315 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 BMXP51813 675 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 IRF3Q14653 427 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 SLC9A3R2Q15599 337 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 PNKDQ8N490 385 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 THRSPQ92748 146 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 UFD1Q92890 307 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 TNFRSF14Q92956 283 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 SLC25A28Q96A46 364 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 C1orf147Q96MC9 270 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 METTL9Q9H1A3 318 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 PPA2Q9H2U2 334 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 Q9H521 79 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 UNKLQ9H9P5 680 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 ZMAT3Q9HA38 289 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 NOX4Q9NPH5 578 aa10.32□□□□□ -0.76
SMARCE1-218ENST00000582955 DNHD1Q96M86 4753 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 MEIOCA2RUB1 952 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 GPX5O75715 221 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 CSTBP04080 98 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF728P0DKX0 622 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 COX7A1P24310 79 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 UBE2E1P51965 193 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ERVFRD-1P60508 538 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 MEF2CQ06413 473 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 INSL4Q14641 139 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ACSM3Q53FZ2 586 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 LIPKQ5VXJ0 399 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ELP2Q6IA86 826 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 Q6P435 159 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 Q6YL49 198 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 ZNF782Q6ZMW2 699 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 PRSS48Q7RTY5 328 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 TRAPPC6BQ86SZ2 158 aa10.31□□□□□ -0.76
SMARCE1-218ENST00000582955 JAGN1Q8N5M9 183 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms