RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 DHRS3O75911 302 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 MPIG6BO95866 241 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 IGLL1P15814 213 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 FAHP16930 419 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 CD33P20138 364 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 KIR3DL2P43630 455 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 RAB13P51153 203 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 ERVFRD-1P60508 538 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 GABARAPL2P60520 117 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 RIPPLY1Q0D2K3 151 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 IRF3Q14653 427 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 CNN3Q15417 329 aaKnown RBP10.94□□□□□ -0.66
SS18-222ENST00000582792 CEACAM21Q3KPI0 293 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 RPL22L1Q6P5R6 122 aaKnown RBP10.94□□□□□ -0.66
SS18-222ENST00000582792 DYNAPQ8N1N2 210 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 PRSS35Q8N3Z0 413 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 CD177Q8N6Q3 437 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 NANOGP1Q8N7R0 232 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 AQP3Q92482 292 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 PRSS22Q9GZN4 317 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 ISG20L2Q9H9L3 353 aaKnown RBP10.94□□□□□ -0.66
SS18-222ENST00000582792 RASL12Q9NYN1 266 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 FRRS1LQ9P0K9 344 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 CLEC2DQ9UHP7 191 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 ERGIC3Q9Y282 383 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 LRRC42Q9Y546 428 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 V9GYS6 101 aa10.94□□□□□ -0.66
SS18-222ENST00000582792 RFPL4AA6NLU0 287 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 TMEM212A6NML5 194 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 OR4C45A6NMZ5 311 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 PTGES3LE9PB15 166 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 RFPL4AL1F8VTS6 287 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 K7EIL1 84 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 MYL12BO14950 172 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 OGG1O15527 345 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 PEX14O75381 377 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 CD1AP06126 327 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 CCL3L1P16619 93 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 C21orf33P30042 268 aaPredicted RBP10.93□□□□□ -0.66
SS18-222ENST00000582792 TAS2R43P59537 309 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 BDH1Q02338 343 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 PLA1AQ53H76 456 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 CEP78Q5JTW2 689 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 ACP7Q6ZNF0 438 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 PRSS48Q7RTY5 328 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 TMEM219Q86XT9 240 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 ZNF561Q8N587 486 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 OR14K1Q8NGZ2 314 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 FOXRED1Q96CU9 486 aaPredicted RBP10.93□□□□□ -0.66
SS18-222ENST00000582792 MND1Q9BWT6 205 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 ABCB10Q9NRK6 738 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 PAK1IP1Q9NWT1 392 aaPredicted RBP10.93□□□□□ -0.66
SS18-222ENST00000582792 PITPNC1Q9UKF7 332 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 GTF2A1LQ9UNN4 478 aa10.93□□□□□ -0.66
SS18-222ENST00000582792 TBL2Q9Y4P3 447 aaKnown RBP10.93□□□□□ -0.66
SS18-222ENST00000582792 DNAH9Q9NYC9 4486 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 OR5B21A6NL26 309 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 SYT7O43581 403 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 RGS10O43665 173 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 PRDX2P32119 198 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 WNT4P56705 351 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 NANOS3P60323 173 aaKnown RBP10.92□□□□□ -0.66
SS18-222ENST00000582792 ZNF273Q14593 569 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 OR2G6Q5TZ20 316 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 C11orf87Q6NUJ2 197 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 HAGHLQ6PII5 290 aaPredicted RBP10.92□□□□□ -0.66
SS18-222ENST00000582792 ZNF782Q6ZMW2 699 aaPredicted RBP10.92□□□□□ -0.66
SS18-222ENST00000582792 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 POC1AQ8NBT0 407 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 OR4M1Q8NGD0 313 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 OR5A2Q8NGI9 324 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 MALSU1Q96EH3 234 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 OR5M11Q96RB7 305 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 ENPP5Q9UJA9 477 aa10.92□□□□□ -0.66
SS18-222ENST00000582792 C17orf98A8MV24 154 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 E9PI62 339 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 DLX6P56179 175 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 CD83Q01151 205 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 CDK5R1Q15078 307 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 ARSJQ5FYB0 599 aaPredicted RBP10.91□□□□□ -0.66
SS18-222ENST00000582792 DMRTC1Q5HYR2 192 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 TMEM42Q69YG0 159 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 DMKNQ6E0U4 476 aaPredicted RBP10.91□□□□□ -0.66
SS18-222ENST00000582792 Q6ZS46 218 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 COMMD2Q86X83 199 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 COMMD4Q9H0A8 199 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 ISYNA1Q9NPH2 558 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 HHLA2Q9UM44 414 aa10.91□□□□□ -0.66
SS18-222ENST00000582792 LSM2Q9Y333 95 aaKnown RBP10.91□□□□□ -0.66
SS18-222ENST00000582792 TRBV2A0A0J9YWF9 115 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 LOC107986453A0A1B0GWG9 222 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 A0A1W2PRX2 142 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 MT-ND2P03891 347 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 TK1P04183 234 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 ALDOBP05062 364 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 ARG1P05089 322 aa10.9□□□□□ -0.66
SS18-222ENST00000582792 PGA5P0DJD9 388 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms