RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PLAUP00749 431 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 AKAIN1P0CW23 69 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 HOXB4P17483 251 aaPredicted RBP10.64□□□□□ -0.71
SRSF1-204ENST00000581979 PRKACAP17612 351 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 GIFP27352 417 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 PDCD1Q15116 288 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 NCMAPQ5T1S8 102 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 RSBN1Q5VWQ0 802 aaPredicted RBP10.64□□□□□ -0.71
SRSF1-204ENST00000581979 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 DEDD2Q8WXF8 326 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 ST8SIA4Q92187 359 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
SRSF1-204ENST00000581979 MRPL24Q96A35 216 aaKnown RBP10.64□□□□□ -0.71
SRSF1-204ENST00000581979 PLK3Q9H4B4 646 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 RHOFQ9HBH0 211 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A10PA6NDY2 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A18PA6NE21 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A16PA6NEW6 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A20PA6NIJ5 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A8PA6NJQ4 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A7PA6NKC0 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 A6NLC8 198 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A22PA8MWA6 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A12PA8MX19 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A5PA8MXJ8 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A23PA8MXZ1 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 PDCD6O75340 191 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 OR7C1O76099 320 aaPredicted RBP10.63□□□□□ -0.71
SRSF1-204ENST00000581979 CD3DP04234 171 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A15PP0C7V4 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A13PP0C7W8 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A14PP0C7W9 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM90A24PP0C7X0 464 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 CBX5P45973 191 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 CCR6P51684 374 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 NKPD1Q17RQ9 610 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 NHLRC3Q5JS37 347 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 ATAD3CQ5T2N8 411 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 PRAMEF6Q5VXH4 476 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
SRSF1-204ENST00000581979 SIGIRRQ6IA17 410 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAAP20Q6NZ36 180 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 STEAP1BQ6NZ63 245 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 Q8IYB0 196 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAM58AQ8N1B3 248 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
SRSF1-204ENST00000581979 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 CACNG6Q9BXT2 260 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF442Q9H7R0 627 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF701Q9NV72 531 aaPredicted RBP10.63□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF581Q9P0T4 197 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF107Q9UII5 783 aaPredicted RBP10.63□□□□□ -0.71
SRSF1-204ENST00000581979 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 A0A1B0GWJ7 208 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 FUOMA2VDF0 154 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 ZSCAN5BA6NJL1 495 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 VSTM5A8MXK1 200 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF736B4DX44 427 aaPredicted RBP10.62□□□□□ -0.71
SRSF1-204ENST00000581979 SPRY3O43610 288 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 PFDN1O60925 122 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 CA11O75493 328 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 CD3EP07766 207 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 CHATP28329 748 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 BCAP31P51572 246 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 MRPS15P82914 257 aaKnown RBP10.62□□□□□ -0.71
SRSF1-204ENST00000581979 MPV17LQ2QL34 196 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 PLA1AQ53H76 456 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF782Q6ZMW2 699 aaPredicted RBP10.62□□□□□ -0.71
SRSF1-204ENST00000581979 LINC00596Q86U02 117 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 GVQW1Q8N7I0 195 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 LILRB1Q8NHL6 650 aaPredicted RBP10.62□□□□□ -0.71
SRSF1-204ENST00000581979 ELMOD3Q96FG2 381 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 PERPQ96FX8 193 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 SMR3AQ99954 134 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 IL36RNQ9UBH0 155 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
SRSF1-204ENST00000581979 NSD1Q96L73 2696 aaPredicted RBP10.62□□□□□ -0.71
SRSF1-204ENST00000581979 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 RAB3DO95716 219 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 TCRBP04435 133 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 PGA5P0DJD9 388 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 FUT3P21217 361 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 CD200P41217 278 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 ZNF81P51508 661 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 GMFBP60983 142 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 IKZF1Q13422 519 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 IL13RA2Q14627 380 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 OR4S1Q8NGB4 309 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 CREB3L1Q96BA8 519 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 UPRTQ96BW1 309 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 Q96MF0 132 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 SULT4A1Q9BR01 284 aa10.61□□□□□ -0.71
SRSF1-204ENST00000581979 UFSP2Q9NUQ7 469 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms