RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 YPEL4Q96NS1 127 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 POMKQ9H5K3 350 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 XKR8Q9H6D3 395 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 DNAJC27Q9NZQ0 273 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 R4GN34 69 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 TOP2AP11388 1531 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 IGKV1OR2-108A0A075B7D4 117 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 C4orf51C9J302 202 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 K7EPK0 472 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 ISLRO14498 428 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 SLC37A4O43826 429 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 IGLV6-57P01721 117 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 IVLP07476 585 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 P0C880 135 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 HRES1P13985 223 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 PRPS1L1P21108 318 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 COL8A2P25067 703 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 CD34P28906 385 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 IL12BP29460 328 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 DEFB134Q4QY38 66 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 TTMPQ5BVD1 217 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF660Q6AZW8 331 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 ST13P4Q8IZP2 240 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF664Q8N3J9 261 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 OR8G5Q8NG78 346 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 OR8S1Q8NH09 359 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 OTUB2Q96DC9 234 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 TMBIM4Q9HC24 238 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 DIABLOQ9NR28 239 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 AGPAT3Q9NRZ7 376 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 SLC22A14Q9Y267 594 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 NID2Q14112 1375 aa2.3□□□□□ -2.04
SMCHD1-205ENST00000581383 CFTRP13569 1480 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 SYNRGQ9UMZ2 1314 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 FFAR1O14842 300 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 GYG2O15488 501 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ENTPD6O75354 484 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ETV1P50549 477 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 RAB38P57729 211 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 UBE2KP61086 200 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ENDOGQ14249 297 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 PDZD11Q5EBL8 140 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 PAGE2Q7Z2X7 111 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 GALNT10Q86SR1 603 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 OR8A1Q8NGG7 326 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 C2orf15Q8WU43 125 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 NELFBQ8WX92 580 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF75AQ96N20 296 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ANAPC13Q9BS18 74 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 TSGA10Q9BZW7 698 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF436Q9C0F3 470 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 DSN1Q9H410 356 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 PLEKHA1Q9HB21 404 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ASF1BQ9NVP2 202 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 NXT1Q9UKK6 140 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 NUP205Q92621 2012 aa2.29□□□□□ -2.04
SMCHD1-205ENST00000581383 EIF4G3O43432 1585 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 LOC100506127A0A0U1RQW1 187 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 A0A1B0GXF2 115 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 H3BQ85 93 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 MYO1DO94832 1006 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 TRGV3P03979 118 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 IGKV5-2P06315 115 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 SOD3P08294 240 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 SCGB1C2P0DMR2 95 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 CCL2P13500 99 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 LCN1P31025 176 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 VSNL1P62760 191 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 IHHQ14623 411 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 SLC9A3R2Q15599 337 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 TAF9Q16594 264 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 Q3ZCU0 254 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 HBMQ6B0K9 141 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 ERICH5Q6P6B1 374 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 TPGS1Q6ZTW0 290 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 SSX6Q7RTT6 188 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 AMN1Q8IY45 258 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 SCGB1C1Q8TD33 95 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 CPB2Q96IY4 423 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 ULBP1Q9BZM6 244 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 CYB5R1Q9UHQ9 305 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 TRAPPC1Q9Y5R8 145 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 VWA8A3KMH1 1905 aa2.28□□□□□ -2.04
SMCHD1-205ENST00000581383 ARHGEF11O15085 1522 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 TOPBP1Q92547 1522 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 CCDC88BA6NC98 1476 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 SNAPC4Q5SXM2 1469 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 ARAP1Q96P48 1450 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 NRCAMQ92823 1304 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 ZSWIM8A7E2V4 1837 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 CD300LBA8K4G0 201 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 H3BP45 60 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 C15orf65H3BRN8 121 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 K7ERS5 55 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 CBR3O75828 277 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 PTHLHP12272 177 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms