RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 HTR3BO95264 441 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 HAND1O96004 215 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 WNT2P09544 360 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 AMY2BP19961 511 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 PRDX2P32119 198 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 CAV3P56539 151 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 LMO4P61968 165 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 NOTCH2Q04721 2471 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 AVPI1Q5T686 147 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 HES5Q5TA89 166 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 SFRP4Q6FHJ7 346 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-203ENST00000580986 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 VPS13CQ709C8 3753 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 CCDC168Q8NDH2 2452 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM104Q8NE00 496 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 CLDND2Q8NHS1 167 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 PPP1R35Q8TAP8 253 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 NEIL1Q96FI4 390 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-203ENST00000580986 Q96MF0 132 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 NKX3-1Q99801 234 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-203ENST00000580986 LPAR5Q9H1C0 372 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 OR5V1Q9UGF6 321 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 A3GALT2U3KPV4 340 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 A0A075B6Q4 140 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 PPIAL4CA0A0B4J2A2 164 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM272A0A1B0GTI8 110 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 A0A1W2PP11 408 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 ISPDA4D126 451 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 METTL21EPA6NDL7 271 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 POM121CA8CG34 1229 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 K7N7A8 449 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 TMPRSS2O15393 492 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 CRTAPO75718 401 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-203ENST00000580986 MPIG6BO95866 241 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR2H2O95918 312 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 GYPAP02724 150 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 SLC2A2P11168 524 aaPredicted RBP8.66□□□□□ -1.02
CCDC47-203ENST00000580986 RPS2P15880 293 aaKnown RBP8.66□□□□□ -1.02
CCDC47-203ENST00000580986 CLDN12P56749 244 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 ARL6IP1Q15041 203 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 P2RY14Q15391 338 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 PIGYQ3MUY2 71 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 IDNKQ5T6J7 187 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 RAB12Q6IQ22 244 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 Q6P435 159 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 MZT2AQ6P582 158 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF841Q6ZN19 808 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR8H2Q8N162 312 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 CD177Q8N6Q3 437 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 BOLLQ8N9W6 283 aaKnown RBP8.66□□□□□ -1.02
CCDC47-203ENST00000580986 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR8B3Q8NGG8 313 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR5D13Q8NGL4 314 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR10K1Q8NGX5 313 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 LGALS14Q8TCE9 139 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 RAB40AQ8WXH6 277 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 SEH1LQ96EE3 360 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 SNX22Q96L94 193 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 GAFA1Q96PS6 74 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 OR8B2Q96RD0 313 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 REG4Q9BYZ8 158 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 SELENOIQ9C0D9 397 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 SLIRPQ9GZT3 109 aaKnown RBP8.66□□□□□ -1.02
CCDC47-203ENST00000580986 ABCG5Q9H222 651 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 NCOR1P1Q9H4R4 102 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 IL36RNQ9UBH0 155 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 HSF4Q9ULV5 492 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 MAB21L2Q9Y586 359 aa8.66□□□□□ -1.02
CCDC47-203ENST00000580986 CREBBPQ92793 2442 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 IGHV3OR15-7A0A075B7D8 119 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 FOXI3A8MTJ6 420 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 GEMIN2O14893 280 aaKnown RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 ADAM20O43506 726 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 PDCD6O75340 191 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 CA11O75493 328 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 OR7C1O76099 320 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 TPPPO94811 219 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF205O95201 554 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 ECDO95905 644 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 ERP29P30040 261 aaKnown RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 PITPNBP48739 271 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 HOXA4Q00056 320 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 IKZF1Q13422 519 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 ESCO2Q56NI9 601 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 LRRC10Q5BKY1 277 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 FOXB2Q5VYV0 432 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 C17orf107Q6ZR85 190 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 DEFB108BQ8NET1 73 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 OR56B1Q8NGI3 324 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 FAM46BQ96A09 425 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 NXF2Q9GZY0 626 aaKnown RBP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 BANF2Q9H503 90 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC47-203ENST00000580986 RHBDL2Q9NX52 303 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 CTSZQ9UBR2 303 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 LPAR3Q9UBY5 353 aa8.65□□□□□ -1.02
CCDC47-203ENST00000580986 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms