RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C1QTNF5Q9BXJ0 243 aa10.9□□□□□ -0.66
CDK5RAP3-217ENST00000580287 MFFQ9GZY8 342 aa10.9□□□□□ -0.66
CDK5RAP3-217ENST00000580287 KLF2Q9Y5W3 355 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-217ENST00000580287 GABRR1P24046 479 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MTCP1P56278 107 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TMEM50BP56557 158 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 B2MP61769 119 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FLI1Q01543 452 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PPP1R1AQ13522 171 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BEND4Q6ZU67 534 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ST6GALNAC5Q9BVH7 336 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FN3KRPQ9HA64 309 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ROS1P08922 2347 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DIDO1Q9BTC0 2240 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ABCD4O14678 606 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 LILRA1O75019 489 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CNOT4O95628 575 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MELTFP08582 738 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 UBBP0CG47 229 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TMEM11P17152 192 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 GSK3AP49840 483 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 KCTD9Q7L273 389 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PXT1Q8NFP0 134 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NANOS1Q8WY41 292 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SFXN3Q9BWM7 321 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FBLN5Q9UBX5 448 aa10.89□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SPRY1O43609 319 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ANGPTL7O43827 346 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PRF1P14222 555 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ARHGDIBP52566 201 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DEFA5Q01523 94 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NKAPLQ5M9Q1 402 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF107Q9UII5 783 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CRHP06850 196 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 GSTP1P09211 210 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RBPJQ06330 500 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 P2RY6Q15077 328 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 AMY2BP19961 511 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CD34P28906 385 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF83P51522 516 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ATP1B3P54709 279 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MICBQ29980 383 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 EIF2S3LQ2VIR3 472 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF546Q86UE3 836 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MARCH1Q8TCQ1 289 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ALX4Q9H161 411 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF701Q9NV72 531 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FZR1Q9UM11 496 aa10.88□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR5H14A6NHG9 310 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 HTR3BO95264 441 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CSTBP04080 98 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CECR9P0C854 216 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RPA2P15927 270 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OPRM1P35372 400 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 IL13RA1P78552 427 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CDSNQ15517 529 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FAM189A2Q15884 450 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CRIP3Q6Q6R5 217 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR56B2PQ8NGI1 322 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PIGCQ92535 297 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CNTNAP3BQ96NU0 1288 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CNTNAP3Q9BZ76 1288 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TMEM8BA6NDV4 472 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF98A6NK75 572 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SDCBPO00560 298 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 COX5BP10606 129 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CCKARP32238 428 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NPY4RP50391 375 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 GMFBP60983 142 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RSU1Q15404 277 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ALKBH6Q3KRA9 238 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BATF2Q8N1L9 274 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 APOBEC3DQ96AK3 386 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BORCS8Q96FH0 119 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NKX6-2Q9C056 277 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR2J1Q9GZK6 312 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 BARX1Q9HBU1 254 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ICE1Q9Y2F5 2266 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 IGHV3-64DA0A0J9YX35 117 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CCL21O00585 134 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MSTNO14793 375 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF205O95201 554 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CBR1P16152 277 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RBMXP38159 391 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms