RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ORAI1Q96D31 301 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 CNBD2Q96M20 576 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 DERL3Q96Q80 235 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 GPER1Q99527 375 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 IL36GQ9NZH8 169 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 CKLFQ9UBR5 152 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 FOXJ3Q9UPW0 622 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 GSTK1Q9Y2Q3 226 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 TRAV8-7A0A075B6U6 113 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 MAGEA13PA6NCF6 341 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 CLDN34H7C241 214 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 SH2D1BO14796 132 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 PIN1P1O15428 100 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 OR2H2O95918 312 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 CALCBP10092 127 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 MAPK3P27361 379 aaPredicted RBP11.84□□□□□ -0.51
MKS1-207ENST00000578789 ZNF93P35789 620 aaPredicted RBP11.84□□□□□ -0.51
MKS1-207ENST00000578789 OR3A1P47881 315 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 OR3A4PP47883 348 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 SNU13P55769 128 aaKnown RBP11.84□□□□□ -0.51
MKS1-207ENST00000578789 DLX6P56179 175 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 BAMBIQ13145 260 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 Q6P435 159 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 GDPD3Q7L5L3 318 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 TCF23Q7RTU1 214 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 PRSS48Q7RTY5 328 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 SATL1Q86VE3 508 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 C11orf42Q8N5U0 333 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 CHST4Q8NCG5 386 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 PPP1R35Q8TAP8 253 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 ZNF184Q99676 751 aaPredicted RBP11.84□□□□□ -0.51
MKS1-207ENST00000578789 NOX4Q9NPH5 578 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 BLOC1S6Q9UL45 172 aa11.84□□□□□ -0.51
MKS1-207ENST00000578789 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
MKS1-207ENST00000578789 SIRPB1O00241 398 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 MGST3O14880 152 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 RBP4P02753 201 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 CCL3L1P16619 93 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 GABRR1P24046 479 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
MKS1-207ENST00000578789 TGFBR2P37173 567 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 PTGFRP43088 359 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 UBE2E1P51965 193 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 DLX1P56177 255 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 EDDM3BP56851 147 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 MEF2CQ06413 473 aaPredicted RBP11.83□□□□□ -0.52
MKS1-207ENST00000578789 KLRD1Q13241 179 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 GPR50Q13585 617 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 IL13RA2Q14627 380 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 MED22Q15528 200 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 GRK1Q15835 563 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 Q6YL49 198 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 MS4A15Q8N5U1 240 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 OR4S1Q8NGB4 309 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 OR51T1Q8NGJ9 327 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 FAM192AQ9GZU8 254 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 CHST6Q9GZX3 395 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
MKS1-207ENST00000578789 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 SC5DO75845 299 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 CSN2P05814 226 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
MKS1-207ENST00000578789 ZNF44P15621 663 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 P2RX3P56373 397 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 PRB3Q04118 309 aaPredicted RBP11.82□□□□□ -0.52
MKS1-207ENST00000578789 EDDM3AQ14507 147 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 RSU1Q15404 277 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 SLC9A3R2Q15599 337 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
MKS1-207ENST00000578789 NHLRC3Q5JS37 347 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 LYPD6Q86Y78 171 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 LDLRAD3Q86YD5 345 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 CDH26Q8IXH8 852 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 UFD1Q92890 307 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 NKX3-1Q99801 234 aaPredicted RBP11.82□□□□□ -0.52
MKS1-207ENST00000578789 LINC00312Q9Y6C7 94 aa11.82□□□□□ -0.52
MKS1-207ENST00000578789 A0A0G2JK05 382 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PPE2 198 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PPK0 400 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PR64 198 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 hADV38S2A0JD32 116 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
MKS1-207ENST00000578789 NPFFO15130 113 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 DENRO43583 198 aaKnown RBP11.81□□□□□ -0.52
MKS1-207ENST00000578789 MELTFP08582 738 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 ZNF728P0DKX0 622 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 EEF1B2P24534 225 aaKnown RBP11.81□□□□□ -0.52
MKS1-207ENST00000578789 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 GABARAPL2P60520 117 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 MLLT11Q13015 90 aaPredicted RBP11.81□□□□□ -0.52
MKS1-207ENST00000578789 TPBGQ13641 420 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 TMEM86BQ8N661 226 aa11.81□□□□□ -0.52
MKS1-207ENST00000578789 NKAIN3Q8N8D7 197 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms