RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 TMEM11P17152 192 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 SULT1A1P50225 295 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF133P52736 654 aaPredicted RBP12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF92Q03936 586 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 RPS19BP1Q86WX3 136 aaKnown RBP12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 LGI3Q8N145 548 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 IL36RNQ9UBH0 155 aa12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
CUEDC1-206ENST00000577830 NUDT19A8MXV4 375 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 TSC22D1Q15714 1073 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 C4orf17Q53FE4 359 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF343Q6P1L6 599 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 TCEAL3Q969E4 200 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 NBEAQ8NFP9 2946 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 HS3ST1O14792 307 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 CNOT4O95628 575 aaKnown RBP12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 HLA-HP01893 362 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 EDN3P14138 238 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 SSR4P51571 173 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 LIPGQ9Y5X9 500 aa12.77□□□□□ -0.36
CUEDC1-206ENST00000577830 MSTNO14793 375 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 CD5P06127 495 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 SNCAP37840 140 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 CNN3Q15417 329 aaKnown RBP12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 CADM4Q8NFZ8 388 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 OR1F12Q8NHA8 337 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 ABHD3Q8WU67 409 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 PLEKHA2Q9HB19 425 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 SIT1Q9Y3P8 196 aa12.77□□□□□ -0.37
CUEDC1-206ENST00000577830 A0A1W2PR80 420 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 ADAM20O43506 726 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 NR2C1P13056 603 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 NKX2-1P43699 371 aaPredicted RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 TMEM187Q14656 261 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 CALHM1Q8IU99 346 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 RDH5Q92781 318 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 BCO1Q9HAY6 547 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 H7C1Q1 480 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 MDKP21741 143 aaPredicted RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 TAGLN2P37802 199 aaKnown RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 LSM6P62312 80 aaKnown RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 CRIP3Q6Q6R5 217 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF488Q96MN9 340 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 PBDC1Q9BVG4 233 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 GPR137BO60478 399 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 RAB5AP20339 215 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 NTF4P34130 210 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 GPM6AP51674 278 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 KIAA0141Q14154 515 aaPredicted RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 TGIF2Q9GZN2 237 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
CUEDC1-206ENST00000577830 C9J4A7 227 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 H0YL77 283 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 TCN2P20062 427 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 UBE2KP61086 200 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 EWSR1Q01844 656 aaKnown RBP eCLIP12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 RPS16P62249 146 aaKnown RBP12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 KMT5CQ86Y97 462 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF561Q8N587 486 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 ZFP92A6NM28 416 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 EIF1BO60739 113 aaKnown RBP12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 SCTP09683 121 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 ATP6V0CP27449 155 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 CHATP28329 748 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 PSG4Q00888 419 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF154Q13106 437 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 IL15RAQ13261 267 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
CUEDC1-206ENST00000577830 CEP250Q9BV73 2442 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 C10orf142B7Z368 130 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 ZNF587BE7ETH6 402 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 ZIC3O60481 467 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 MT-ND4LP03901 98 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 P04436 131 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 CCL1P22362 96 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 GDF1P27539 372 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 OR2C3Q8N628 320 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 C15orf54Q8N8G6 183 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 SGCZQ96LD1 299 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 NOSIPQ9Y314 301 aaKnown RBP12.74□□□□□ -0.37
CUEDC1-206ENST00000577830 A0A0U1RQV5 110 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms