RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 OR4C13Q8NGP0 309 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 APH1BQ8WW43 257 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 MEGF9Q9H1U4 602 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
SF3B3-215ENST00000577085 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 PSPNO60542 156 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 OR2H2O95918 312 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 GABRA5P31644 462 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 SOX2P48431 317 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 DLX6P56179 175 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 P2RX3P56373 397 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 RCN1Q15293 331 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 FAM189A2Q15884 450 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 RPL22L1Q6P5R6 122 aaKnown RBP12.6□□□□□ -0.39
SF3B3-215ENST00000577085 LIAT1Q6ZQX7 453 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 PACRGLQ8N7B6 248 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 OR4S1Q8NGB4 309 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 CNIH3Q8TBE1 160 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 CITED1Q99966 193 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 GAL3ST2Q9H3Q3 398 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 C16orf95Q9H693 158 aa12.6□□□□□ -0.39
SF3B3-215ENST00000577085 FGF20Q9NP95 211 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-215ENST00000577085 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-215ENST00000577085 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 H3BUI4 141 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 DEGS1O15121 323 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
SF3B3-215ENST00000577085 TSPAN9O75954 239 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 CLPXO76031 633 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 ALX3O95076 343 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 CLIC3O95833 236 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 LIMS3P0CW19 117 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 LIMS4P0CW20 117 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 PAX6P26367 422 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 OR3A1P47881 315 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 ETV1P50549 477 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 GTF2A1P52655 376 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-215ENST00000577085 PPP3R1P63098 170 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 SSX2Q16385 188 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 SLC35E4Q6ICL7 350 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 LHFPL4Q7Z7J7 247 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 DHRSXQ8N5I4 330 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 NDNFQ8TB73 568 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 MALSU1Q96EH3 234 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-215ENST00000577085 JAM3Q9BX67 310 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 EXOSC1Q9Y3B2 195 aaKnown RBP12.59□□□□□ -0.39
SF3B3-215ENST00000577085 SESN1Q9Y6P5 492 aa12.59□□□□□ -0.39
SF3B3-215ENST00000577085 ERP29P30040 261 aaKnown RBP12.58□□□□□ -0.4
SF3B3-215ENST00000577085 MTNR1BP49286 362 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 PROK1P58294 105 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 IL18R1Q13478 541 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 RSU1Q15404 277 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 OR52W1Q6IF63 320 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 TNFAIP8L1Q8WVP5 186 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 TMEM80Q96HE8 168 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 AJUBAQ96IF1 538 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF649Q9BS31 505 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 VCXQ9H320 206 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 ING3Q9NXR8 418 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 PITPNC1Q9UKF7 332 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 DIMT1Q9UNQ2 313 aaKnown RBP12.58□□□□□ -0.4
SF3B3-215ENST00000577085 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
SF3B3-215ENST00000577085 IGHV2-26A0A0B4J1V2 119 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 A0A0G2JK05 382 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 SLC34A1Q06495 639 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 AESQ08117 197 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 CDK5R1Q15078 307 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 KRBOX4Q5JUW0 171 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 OR2G6Q5TZ20 316 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 ASPHD2Q6ICH7 369 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 C11orf88Q6PI97 169 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 S100A13Q99584 98 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 TMEM133Q9H2Q1 129 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 BABAM2Q9NXR7 383 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 TAS2R4Q9NYW5 299 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.57□□□□□ -0.4
SF3B3-215ENST00000577085 CKLFQ9UBR5 152 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 HILPDAQ9Y5L2 63 aa12.57□□□□□ -0.4
SF3B3-215ENST00000577085 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ODF3BA8MYP8 253 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 F2RL2O00254 374 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms