RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CDX1P47902 265 aaPredicted RBP7.09□□□□□ -1.27
SMG6-218ENST00000575454 MNAT1P51948 309 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 HES1Q14469 280 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 RBM39Q14498 530 aaKnown RBP7.09□□□□□ -1.27
SMG6-218ENST00000575454 GINS1Q14691 196 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 CXorf66Q5JRM2 361 aaPredicted RBP7.09□□□□□ -1.27
SMG6-218ENST00000575454 OR2T5Q6IEZ7 315 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 Q6ZSR3 168 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 C18orf65Q6ZTR6 163 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 SLC25A26Q70HW3 274 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 SLC35E3Q7Z769 313 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 PGAM4Q8N0Y7 254 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 STPG2Q8N412 459 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 DRAM1Q8N682 238 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 C5orf56Q8N8D9 126 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 OR52N4Q8NGI2 321 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 OR2T29Q8NH02 315 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 OR9G1Q8NH87 305 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 TOMM40LQ969M1 308 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 FEVQ99581 238 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 MNTQ99583 582 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 NIPSNAP1Q9BPW8 284 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 CADM1Q9BY67 442 aaKnown RBP7.09□□□□□ -1.27
SMG6-218ENST00000575454 DCLRE1BQ9H816 532 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 PLEKHA1Q9HB21 404 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 ARGLU1Q9NWB6 273 aaPredicted RBP7.09□□□□□ -1.27
SMG6-218ENST00000575454 NDE1Q9NXR1 346 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 TAS2R1Q9NYW7 299 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 SCOCQ9UIL1 159 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 OR52A1Q9UKL2 312 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 SNX5Q9Y5X3 404 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 R4GMQ9 66 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 U3KQV3 271 aa7.09□□□□□ -1.27
SMG6-218ENST00000575454 TRBV2A0A0J9YWF9 115 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 A0A1B0GTI1 187 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 F8VVB4 439 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 F8VWA3 439 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 SH2D1BO14796 132 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 RRP9O43818 475 aaKnown RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 PSPNO60542 156 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 LY86O95711 162 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 IGHA1P01876 353 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ELANEP08246 267 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 TMEM11P17152 192 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 OR3A1P47881 315 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 RAB7AP51149 207 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 HCCSP53701 268 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ZNF91Q05481 1191 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 PPP1R8Q12972 351 aaKnown RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 FOXE3Q13461 319 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 APOFQ13790 326 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ZNF260Q3ZCT1 412 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 FAM98BQ52LJ0 330 aaKnown RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 FAM27D1Q5T7N8 215 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ZNF322Q6U7Q0 402 aaPredicted RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 C16orf89Q6UX73 402 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 FAM58AQ8N1B3 248 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 GIPC3Q8TF64 312 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 C10orf35Q96D05 121 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 BORCS8Q96FH0 119 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 DUX3Q96PT4 197 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 CNN2Q99439 309 aaKnown RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 ZNF556Q9HAH1 456 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ZNF286AQ9HBT8 521 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 EXOSC4Q9NPD3 245 aaKnown RBP7.08□□□□□ -1.28
SMG6-218ENST00000575454 ACTR3BQ9P1U1 418 aa7.08□□□□□ -1.28
SMG6-218ENST00000575454 ODAMA1E959 279 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 A6NIN4 97 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 ZNF729A6NN14 1252 aaPredicted RBP7.07□□□□□ -1.28
SMG6-218ENST00000575454 CCRL2O00421 344 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 SYT7O43581 403 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 INMTO95050 263 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
SMG6-218ENST00000575454 OSMP13725 252 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 CCL1P22362 96 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 SLC2A5P22732 501 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 RBP2P50120 134 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 ATP1B3P54709 279 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 CDK5Q00535 292 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 MFGE8Q08431 387 aaPredicted RBP7.07□□□□□ -1.28
SMG6-218ENST00000575454 MADCAM1Q13477 382 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 UBE2V2Q15819 145 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 CYP2R1Q6VVX0 501 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 TGIF2LXQ8IUE1 241 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 OR8H3Q8N146 312 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 RNF152Q8N8N0 203 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 ZNF565Q8N9K5 539 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 CHST4Q8NCG5 386 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 DNAAF1Q8NEP3 725 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 BBS1Q8NFJ9 593 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 OR56B4Q8NH76 319 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 HAVCR2Q8TDQ0 301 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 C4orf3Q8WVX3 66 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 PP6455Q8WZ26 134 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 ADI1Q9BV57 179 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
SMG6-218ENST00000575454 OR6C3Q9NZP0 311 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms