RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 OR2H2O95918 312 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 ZFP36P26651 326 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 CAV3P56539 151 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 RBM11P57052 281 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 NCS1P62166 190 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 TAF9Q16594 264 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 ATAD3CQ5T2N8 411 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 FAM166AQ6J272 317 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 ZNF841Q6ZN19 808 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 LINC00596Q86U02 117 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 CHST4Q8NCG5 386 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 OR51D1Q8NGF3 324 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 OR5D13Q8NGL4 314 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 TMEM186Q96B77 213 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 FAM3DQ96BQ1 224 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 C1orf159Q96HA4 380 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 NAA50Q9GZZ1 169 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 FAM234AQ9H0X4 552 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 SEBOXQ9HB31 216 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 DAPK2Q9UIK4 370 aa12.06□□□□□ -0.48
NPLOC4-218ENST00000574964 CCDC160A6NGH7 325 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 A8MXK9 166 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 GEMIN2O14893 280 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 GPR37O15354 613 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 CD5LO43866 347 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 GABARAPO95166 117 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 LY6G6DO95868 133 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 ECDO95905 644 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 VSIG8P0DPA2 414 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 SLC2A2P11168 524 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 C2orf76Q3KRA6 126 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 PAN3Q58A45 887 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 IDNKQ5T6J7 187 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 Q6P435 159 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 SFXN4Q6P4A7 337 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 BTNL3Q6UXE8 466 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 SLC16A12Q6ZSM3 486 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 BTN2A1Q7KYR7 527 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 GDPD3Q7L5L3 318 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 CROCCP3Q8IVE0 287 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 FGFRL1Q8N441 504 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 C1orf147Q96MC9 270 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 SMR3AQ99954 134 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 URM1Q9BTM9 101 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 KCNK15Q9H427 330 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 KCNS2Q9ULS6 477 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 OTOGQ6ZRI0 2925 aa12.05□□□□□ -0.48
NPLOC4-218ENST00000574964 AKAP9Q99996 3911 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 A0A0G2JK05 382 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 A0A0G2JMP0 313 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 A0A0X1KG70 313 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 TMEM82A0PJX8 343 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 H3BUI4 141 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 K7N7A8 449 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 IL1AP01583 271 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 TK1P04183 234 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 EDDM3AQ14507 147 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 GRK1Q15835 563 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 DCAF12L2Q5VW00 463 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 NR2C2APQ86WQ0 139 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 OR8H2Q8N162 312 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 OR4M2Q8NGB6 313 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 RAB2BQ8WUD1 216 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 LIN7BQ9HAP6 207 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
NPLOC4-218ENST00000574964 A0A1W2PQ09 198 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 FUOMA2VDF0 154 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 TMEM14DPA8MWL7 114 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 KIAA1324LA8MWY0 1029 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 HSPB6O14558 160 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 ENSAO43768 121 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 ZNF737O75373 536 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 LMO1P25800 156 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 TMBIM6P55061 237 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 EDDM3BP56851 147 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 RPS27AP62979 156 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 UNC119Q13432 240 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 CTF1Q16619 201 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 C11orf91Q3C1V1 193 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 METAP1DQ6UB28 335 aaPredicted RBP12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 USP43Q70EL4 1123 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 FAM185AQ8N0U4 392 aa12.03□□□□□ -0.48
NPLOC4-218ENST00000574964 OR4S1Q8NGB4 309 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms