RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RPL36A-HNRNPH2H7BZ11 118 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 LINC01387J3KSC0 135 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 DIRAS3O95661 229 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 FAM90A15PP0C7V4 464 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 SEC11BP0C7V7 166 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 FAM90A13PP0C7W8 464 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 FAM90A14PP0C7W9 464 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 FAM90A24PP0C7X0 464 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 DVL1P1P54792 670 aaPredicted RBP7.71□□□□□ -1.18
NCBP3-204ENST00000574911 ARF1P84077 181 aaKnown RBP7.71□□□□□ -1.18
NCBP3-204ENST00000574911 CLEC9AQ6UXN8 241 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 SLC25A26Q70HW3 274 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 RAB11FIP2Q7L804 512 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 DMBX1Q8NFW5 382 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 OR4D5Q8NGN0 318 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.18
NCBP3-204ENST00000574911 FGF23Q9GZV9 251 aaPredicted RBP7.71□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF442Q9H7R0 627 aa7.71□□□□□ -1.18
NCBP3-204ENST00000574911 NOSIPQ9Y314 301 aaKnown RBP7.71□□□□□ -1.18
NCBP3-204ENST00000574911 AGPAT2O15120 278 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 PHF1O43189 567 aaPredicted RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 F10P00742 488 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 PPYP01298 95 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 IGHV3-9P01782 118 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 OR8U9P0C7N5 309 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 NFYBP25208 207 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 CD80P33681 288 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 UCP2P55851 309 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 HERV-K104P61576 105 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SRSF7Q16629 238 aaKnown RBP eCLIP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SPINK14Q6IE38 97 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 OR8U1Q8NH10 309 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 HPSE2Q8WWQ2 592 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 KIRREL1Q96J84 757 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 TP53RKQ96S44 253 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 C11orf1Q9H5F2 150 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SLC7A10Q9NS82 523 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 FAM212BQ9NTI7 297 aaPredicted RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 BOKQ9UMX3 212 aaPredicted RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 LHX6Q9UPM6 363 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 RCL1Q9Y2P8 373 aaKnown RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 TMED3Q9Y3Q3 217 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 BORCS7-ASMTA0A0B4J1R7 106 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 MPPED1O15442 326 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 ST8SIA3O43173 380 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 MRPL33O75394 65 aaKnown RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 OR7C1O76099 320 aaPredicted RBP7.7□□□□□ -1.18
NCBP3-204ENST00000574911 GLAP06280 429 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 DANCRP0C864 163 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 GLI4P10075 376 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SPP1P10451 314 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 RFC3P40938 356 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 KCNJ3P48549 501 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 LHX2P50458 406 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SWI5Q1ZZU3 235 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 IGSF11Q5DX21 431 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 FBXW12Q6X9E4 464 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SAXO1Q8IYX7 474 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 FAM185AQ8N0U4 392 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 EXTL1Q92935 676 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 SPRY4Q9C004 299 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 PRDM6Q9NQX0 595 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 CRIM1Q9NZV1 1036 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 LRFN1Q9P244 771 aa7.7□□□□□ -1.18
NCBP3-204ENST00000574911 C3orf85A0A1B0GTC6 90 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 TRDCB7Z8K6 153 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 BCL3P20749 454 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 PRDX4Q13162 271 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 FAM76BQ5HYJ3 339 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 BATF2Q8N1L9 274 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 COMMD1Q8N668 190 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SLC35G3Q8N808 338 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 OR2M7Q8NG81 312 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 OR56B2PQ8NGI1 322 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 THOC3Q96J01 351 aaKnown RBP7.69□□□□□ -1.18
NCBP3-204ENST00000574911 ZPBPQ9BS86 351 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SCRT1Q9BWW7 348 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SAV1Q9H4B6 383 aaPredicted RBP7.69□□□□□ -1.18
NCBP3-204ENST00000574911 Q9N2K0 584 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 FAM86C1Q9NVL1 165 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 CACFD1Q9UGQ2 172 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 MLXQ9UH92 298 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 MYO7BQ6PIF6 2116 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 PRSS44E7EML9 344 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SS18L1O75177 396 aaPredicted RBP7.69□□□□□ -1.18
NCBP3-204ENST00000574911 NEURL1O76050 574 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 COX5BP10606 129 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 LMO1P25800 156 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 GNRHRP30968 328 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SNCAP37840 140 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 NOVA1P51513 510 aaKnown RBP7.69□□□□□ -1.18
NCBP3-204ENST00000574911 CLDN18P56856 261 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 FGF12P61328 243 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 RND3P61587 244 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SRPXP78539 464 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 DPPA2Q7Z7J5 298 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 SLAMF9Q96A28 289 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 TMEM56Q96MV1 263 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms