RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 IGKV3-11P04433 115 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 CLN3Q13286 438 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 CXorf66Q5JRM2 361 aaPredicted RBP12.53□□□□□ -0.4
SMG6-215ENST00000574501 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
SMG6-215ENST00000574501 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 PLA2G2FQ9BZM2 168 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 ANGPTL7O43827 346 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 COL9A1P20849 921 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 NKX2-1P43699 371 aaPredicted RBP12.53□□□□□ -0.4
SMG6-215ENST00000574501 CLRN1P58418 232 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 TLE4Q04727 773 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 ZP4Q12836 540 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 ARL6IP1Q15041 203 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 TMEM196Q5HYL7 178 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 COL13A1Q5TAT6 717 aaPredicted RBP12.53□□□□□ -0.4
SMG6-215ENST00000574501 ABLIM2Q6H8Q1 611 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 ADAMTS9Q9P2N4 1935 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
SMG6-215ENST00000574501 F5P12259 2224 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 A0A1W2PQD3 144 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 FAM221BA6H8Z2 402 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 TGOLN2O43493 480 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 PAX5Q02548 391 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 ZNF154Q13106 437 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 TEX38Q6PEX7 206 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 Q6ZSR6 202 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 SLC16A14Q7RTX9 510 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 PGAM5Q96HS1 289 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 WFIKKN1Q96NZ8 548 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 SYT3Q9BQG1 590 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 LANCL2Q9NS86 450 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.4
SMG6-215ENST00000574501 MARCH11A6NNE9 402 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 ZNF732B4DXR9 585 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 GCGP01275 180 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 OPN1MWP04001 364 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 OPN1MW2P0DN77 364 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 OPN1MW3P0DN78 364 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 NUBP1P53384 320 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.41
SMG6-215ENST00000574501 VAMP2P63027 116 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 PMS2P11Q13670 270 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 ADGRG7Q96K78 797 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 ZNF665Q9H7R5 613 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.41
SMG6-215ENST00000574501 SERINC1Q9NRX5 453 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 IL17BQ9UHF5 180 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 PIAS3Q9Y6X2 628 aa12.52□□□□□ -0.41
SMG6-215ENST00000574501 A6NNC1 897 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 TMEM150CB9EJG8 249 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 M0R143 59 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 TMEM50AO95807 157 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 EN2P19622 333 aaPredicted RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 CCL1P22362 96 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 EFNA3P52797 238 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 ERVS71-1P61550 626 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 RTL10Q7L3V2 364 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 F5H5K5 113 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 SPRY1O43609 319 aaPredicted RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 CTSEP14091 401 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 GALNSP34059 522 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 FAM180AQ6UWF9 173 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 LCN15Q6UWW0 184 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 D2HGDHQ8N465 521 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 Q96M66 194 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 MRPL13Q9BYD1 178 aaKnown RBP12.51□□□□□ -0.41
SMG6-215ENST00000574501 WWTR1Q9GZV5 400 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
SMG6-215ENST00000574501 HLA-HP01893 362 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 HBE1P02100 147 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 TK1P04183 234 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 NPSP0C0P6 89 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
SMG6-215ENST00000574501 PCP4P48539 62 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 TLE1Q04724 770 aa12.5□□□□□ -0.41
SMG6-215ENST00000574501 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
SMG6-215ENST00000574501 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
SMG6-215ENST00000574501 PDCD1Q15116 288 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms