RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ADAM5Q6NVV9 412 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 FGFBP3Q8TAT2 258 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 PBDC1Q9BVG4 233 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 C11orf1Q9H5F2 150 aa16.48■□□□□ 0.23
SCARF1-206ENST00000573852 METTL1Q9UBP6 276 aaKnown RBP16.48■□□□□ 0.23
SCARF1-206ENST00000573852 IGHV2-5P01817 119 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 S100A9P06702 114 aaKnown RBP16.47■□□□□ 0.23
SCARF1-206ENST00000573852 PI4KAP42356 2102 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 HERV-K104P61576 105 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 CCL20P78556 96 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF92Q03936 586 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 CLINT1Q14677 625 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 GNMTQ14749 295 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 RHEBQ15382 184 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 C5orf24Q7Z6I8 188 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 OR1J1Q8NGS3 322 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 NTNG2Q96CW9 530 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 ALKBH3Q96Q83 286 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-206ENST00000573852 ABHD14AQ9BUJ0 271 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 FSCN3Q9NQT6 498 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 P4HTMQ9NXG6 502 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 GPR37O15354 613 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 COX6A1P12074 109 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 TCN2P20062 427 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 EPHA8P29322 1005 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-206ENST00000573852 OR2B8PP59922 312 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 PSG4Q00888 419 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 MALLQ13021 153 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 CCDC71LQ8N9Z2 235 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 SUMF1Q8NBK3 374 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 SLC39A7Q92504 469 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 SH2D2AQ9NP31 389 aa16.47■□□□□ 0.23
SCARF1-206ENST00000573852 C3orf85A0A1B0GTC6 90 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 IGSF23A1L1A6 192 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 MPPED1O15442 326 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 PPYP01298 95 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 SSR4P51571 173 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 KRTAP27-1Q3LI81 207 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 FAM209BQ5JX69 171 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF468Q5VIY5 522 aaPredicted RBP16.46■□□□□ 0.23
SCARF1-206ENST00000573852 LURAP1LQ8IV03 231 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 OR2C3Q8N628 320 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 PIGCQ92535 297 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF442Q9H7R0 627 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 GSN-AS1Q9NRJ2 163 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 IL36GQ9NZH8 169 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 hCG_38984A0A1B0GV85 526 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 FABP1P07148 127 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 OR8U8P0C7N1 319 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 NQO2P16083 231 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 FUT6P51993 359 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 RBM11P57052 281 aaKnown RBP16.46■□□□□ 0.23
SCARF1-206ENST00000573852 POLR2GP62487 172 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCARF1-206ENST00000573852 CALHM1Q8IU99 346 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 ZNF251Q9BRH9 671 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 WDR54Q9H977 334 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 NIT2Q9NQR4 276 aa16.46■□□□□ 0.23
SCARF1-206ENST00000573852 PTRH2Q9Y3E5 179 aaKnown RBP16.46■□□□□ 0.23
SCARF1-206ENST00000573852 PLCXD3Q63HM9 321 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM211Q6ICI0 200 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 SPEM1Q8N4L4 309 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 SF3B5Q9BWJ5 86 aaKnown RBP16.45■□□□□ 0.22
SCARF1-206ENST00000573852 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCARF1-206ENST00000573852 TRDCB7Z8K6 153 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 OMGP23515 440 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 ATP6V0CP27449 155 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 GNRHRP30968 328 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 NPBWR2P48146 333 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 YRDCQ86U90 279 aaKnown RBP16.45■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF565Q8N9K5 539 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 DUSP23Q9BVJ7 150 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF700Q9H0M5 742 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM222Q9H0R3 208 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 WNT5BQ9H1J7 359 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 SLC7A11Q9UPY5 501 aa16.45■□□□□ 0.22
SCARF1-206ENST00000573852 A0A1B0GW64 132 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 CDRT15L2A8MXV6 281 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 OR7C1O76099 320 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-206ENST00000573852 FUT3P21217 361 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 B3GALT5-AS1P59052 145 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 RAC3P60763 192 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 LFNGQ8NES3 379 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 OR2G3Q8NGZ4 309 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 CPT1CQ8TCG5 803 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF724A8MTY0 619 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF587BE7ETH6 402 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 CBR3O75828 277 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 CYC1P08574 325 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 RPS23P62266 143 aaKnown RBP16.44■□□□□ 0.22
SCARF1-206ENST00000573852 SOHLH1Q5JUK2 328 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 ZNF100Q8IYN0 542 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 ZFP62Q8NB50 900 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-206ENST00000573852 TMEM171Q8WVE6 324 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 MALSU1Q96EH3 234 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 GPHA2Q96T91 129 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 OR2H1Q9GZK4 316 aa16.44■□□□□ 0.22
SCARF1-206ENST00000573852 TRAV20A0A0B4J274 112 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 A0A0G2JMM0 328 aa16.43■□□□□ 0.22
SCARF1-206ENST00000573852 A0A1W2PPB8 328 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms