RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
RPAIN-213ENST00000573577 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
RPAIN-213ENST00000573577 DNHD1Q96M86 4753 aa11.21□□□□□ -0.62
RPAIN-213ENST00000573577 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 KIR2DS1A0A191URI9 304 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 C22orf46C9J442 243 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 PDCD5O14737 125 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 CDRT1O95170 752 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 HTR3BO95264 441 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 FSHBP01225 129 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 SELLP14151 372 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 EPHA1P21709 976 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 MYL9P24844 172 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 CEBPDP49716 269 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 GP2P55259 537 aaKnown RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 SNU13P55769 128 aaKnown RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 COL10A1Q03692 680 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 LRRTM1Q86UE6 522 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 CHST4Q8NCG5 386 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 Q8NFD4 153 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 SNX22Q96L94 193 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 RPUSD1Q9UJJ7 312 aaKnown RBP11.2□□□□□ -0.62
RPAIN-213ENST00000573577 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
RPAIN-213ENST00000573577 TRAV1-2A0A0B4J238 106 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 K7N7A8 449 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 TCF21O43680 179 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 TFF1P04155 84 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 TK1P04183 234 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 UBBP0CG47 229 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 CALCBP10092 127 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 GTF2F2P13984 249 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 SERPINA2P20848 420 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 GABRR1P24046 479 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 FGF9P31371 208 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-213ENST00000573577 PAX8Q06710 450 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 IL13RA2Q14627 380 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 TIMM50Q3ZCQ8 353 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 SLC22A6Q4U2R8 563 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 LINC00596Q86U02 117 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 OSR2Q8N2R0 312 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 OR51T1Q8NGJ9 327 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 OR10K1Q8NGX5 313 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 MRPS24Q96EL2 167 aaKnown RBP11.19□□□□□ -0.62
RPAIN-213ENST00000573577 NKX3-1Q99801 234 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-213ENST00000573577 DCTN5Q9BTE1 182 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 ARHGAP32A7KAX9 2087 aa11.19□□□□□ -0.62
RPAIN-213ENST00000573577 A0A1W2PPH5 198 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 TRIM64CA6NLI5 447 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 RNF212BA8MTL3 300 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 DEGS1O15121 323 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 ZNF737O75373 536 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 OR2H2O95918 312 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 PPIAL4GP0DN37 164 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 ZNF44P15621 663 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 CD36P16671 472 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 JUNBP17275 347 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-213ENST00000573577 HTR2CP28335 458 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 DUSP1P28562 367 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 NHLRC3Q5JS37 347 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 C1orf100Q5SVJ3 147 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 C22orf42Q6IC83 251 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 GDPD3Q7L5L3 318 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 LYPD6Q86Y78 171 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 CMTM4Q8IZR5 234 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 OR8H2Q8N162 312 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 OR4D6Q8NGJ1 314 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 OR6M1Q8NGM8 313 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 CST11Q9H112 138 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 PLGRKTQ9HBL7 147 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 ST3GAL6Q9Y274 331 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 WNK2Q9Y3S1 2297 aa11.18□□□□□ -0.62
RPAIN-213ENST00000573577 A0A1W2PQ09 198 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 FUOMA2VDF0 154 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 H3BUI4 141 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 SIRPB1O00241 398 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 FCN3O75636 299 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 LMO1P25800 156 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 RBM11P57052 281 aaKnown RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 RPL31P62899 125 aaKnown RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 SCN1BQ07699 218 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 GRK1Q15835 563 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 METTL11BQ5VVY1 283 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 FGFRL1Q8N441 504 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 LY6G5BQ8NDX9 201 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 ZNF418Q8TF45 676 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 AK6Q9Y3D8 172 aaKnown RBP11.17□□□□□ -0.62
RPAIN-213ENST00000573577 KPTNQ9Y664 436 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 V9GY05 133 aa11.17□□□□□ -0.62
RPAIN-213ENST00000573577 A0A0A6YYJ9 748 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms