RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ST6GAL2Q96JF0 529 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 OR4K3Q96R72 315 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 METTL26Q96S19 204 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 MND1Q9BWT6 205 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 ULBP3Q9BZM4 244 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 CHST5Q9GZS9 411 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 C20orf85Q9H1P6 137 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 NANOGQ9H9S0 305 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 GNB4Q9HAV0 340 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 HMG20AQ9NP66 347 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 GLS2Q9UI32 602 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 PSG8Q9UQ74 426 aa4.01□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM135AQ9P2D6 1515 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 A2MP01023 1474 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 IGLV1-36A0A0B4J1U3 117 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 IGKV1D-13A0A0B4J2D9 117 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 A0A1W2PS18 150 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 TMEM150BA6NC51 233 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 OR5H1A6NKK0 313 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 TMX2-CTNND1H3BSU7 103 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 K7EQD1 137 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 COPEO14579 308 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 XKRYO14609 159 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 HCRTR1O43613 425 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 EDIL3O43854 480 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 NPIPB7O75200 414 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 BANF1O75531 89 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 GCM2O75603 506 aaPredicted RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 LYPLA1O75608 230 aaPredicted RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 CCNE2O96020 404 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 APOA2P02652 100 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 S100A8P05109 93 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 PFN1P07737 140 aaKnown RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 OR5H8P0DN80 308 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 IGKV1-13P0DP09 117 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 ERGP11308 486 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 SPNP16150 400 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 CXCL3P19876 107 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 RAB3AP20336 220 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 CTRLP40313 264 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 LGALS7P47929 136 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 TFF2Q03403 129 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 CD47Q08722 323 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 PMAIP1Q13794 54 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 EBPQ15125 230 aaKnown RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 ATAD3CQ5T2N8 411 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 RUSC1-AS1Q66K80 236 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF66Q6ZN08 573 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 TMPPEQ6ZT21 453 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 RAB42Q8N4Z0 105 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM24BQ8N5W8 94 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 OR52L1Q8NGH7 329 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 OR2A12Q8NGT7 310 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 OR1S1Q8NH92 325 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 CHCHD10Q8WYQ3 142 aaPredicted RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 EXTL1Q92935 676 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF486Q96H40 463 aaPredicted RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 SLC45A3Q96JT2 553 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 CAPZA3Q96KX2 299 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 KIR2DL4Q99706 377 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 HSPB9Q9BQS6 159 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 EFCAB11Q9BUY7 163 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 SLIRPQ9GZT3 109 aaKnown RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 SH3BGRL3Q9H299 93 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 EBF2Q9HAK2 575 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 LYRM2Q9NU23 88 aaPredicted RBP4□□□□□ -1.77
TOPBP1-210ENST00000572787 MED29Q9NX70 200 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 COA4Q9NYJ1 87 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 XCL2Q9UBD3 114 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 EVPLQ92817 2033 aa4□□□□□ -1.77
TOPBP1-210ENST00000572787 PTPRJQ12913 1337 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CD109Q6YHK3 1445 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 BORCS7-ASMTA0A0B4J1R7 106 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 TRAV8-6A0A0B4J262 113 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 IGLV5-39A0A0G2JS06 123 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 C9orf170A2RU37 121 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 G3V2T6 193 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 H0Y9J4 135 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 TNFRSF13BO14836 293 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 ARL6IP5O75915 188 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 C6orf47O95873 294 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 IFNA4P05014 189 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 REG1AP05451 166 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 OR4A8P0C604 315 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CT45A10P0DMU9 189 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CXCL2P19875 107 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 S100A7P31151 101 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 PHBP35232 272 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 GGT2P36268 569 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CSRP3P50461 194 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 RPS20P60866 119 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 RUNX1Q01196 453 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 LAMTOR4Q0VGL1 99 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 C1DQ13901 141 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 TGIF1Q15583 401 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 CNPY1Q3B7I2 92 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 ODF3L2Q3SX64 289 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 C1orf194Q5T5A4 169 aa3.99□□□□□ -1.77
TOPBP1-210ENST00000572787 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms