RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 GPR27Q9NS67 375 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 GNG13Q9P2W3 67 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 CRYM-AS1A6NIL9 109 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 SERPINE2P07093 398 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 ACAA1P09110 424 aaPredicted RBP13.31□□□□□ -0.28
USP43-202ENST00000570475 IAPPP10997 89 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 WDR74Q6RFH5 385 aaPredicted RBP13.31□□□□□ -0.28
USP43-202ENST00000570475 STX12Q86Y82 276 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 EXTL1Q92935 676 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 ZNF488Q96MN9 340 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 FOXB1Q99853 325 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 SRXN1Q9BYN0 137 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 SMOC1Q9H4F8 434 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 PATE3B3GLJ2 98 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 RAB11AP62491 216 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 RPL23AP62750 156 aaKnown RBP13.31□□□□□ -0.28
USP43-202ENST00000570475 IGFBP7Q16270 282 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 LIAT1Q6ZQX7 453 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 BEND4Q6ZU67 534 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 DPPA2Q7Z7J5 298 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 LHFPL1Q86WI0 220 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 KMT5CQ86Y97 462 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 THNSL2Q86YJ6 484 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 OR2C3Q8N628 320 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 MIOXQ9UGB7 285 aa13.31□□□□□ -0.28
USP43-202ENST00000570475 TRBV6-7A0A0A0MS04 114 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 MSTNO14793 375 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 NDUFA2O43678 99 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 GPR137BO60478 399 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 LSM6P62312 80 aaKnown RBP13.3□□□□□ -0.28
USP43-202ENST00000570475 HABP2Q14520 560 aaPredicted RBP13.3□□□□□ -0.28
USP43-202ENST00000570475 HLA-BQ31612 363 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 Q96M66 194 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 SUCNR1Q9BXA5 334 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 COLCA2A8K830 154 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 MRPL33O75394 65 aaKnown RBP13.3□□□□□ -0.28
USP43-202ENST00000570475 IFNA17P01571 189 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 MT-ND4LP03901 98 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 RAB5AP20339 215 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 PTGDSP41222 190 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 RAB2AP61019 212 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 RHEBQ15382 184 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 ZNF343Q6P1L6 599 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 OR56B2PQ8NGI1 322 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 IFI44Q8TCB0 444 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 PLA2G2EQ9NZK7 142 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 C3orf85A0A1B0GTC6 90 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 FAM166BA8MTA8 275 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
USP43-202ENST00000570475 ZNF154Q13106 437 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 NSUN5P2Q63ZY6 315 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 RTL6Q6ICC9 239 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 SLC35B3Q9H1N7 401 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 IL36RNQ9UBH0 155 aa13.3□□□□□ -0.28
USP43-202ENST00000570475 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
USP43-202ENST00000570475 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
USP43-202ENST00000570475 ATP6V0CP27449 155 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 FOLR3P41439 243 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 FGF8P55075 233 aaPredicted RBP13.29□□□□□ -0.28
USP43-202ENST00000570475 ELLP55199 621 aaPredicted RBP13.29□□□□□ -0.28
USP43-202ENST00000570475 CCL20P78556 96 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 EWSR1Q01844 656 aaKnown RBP eCLIP13.29□□□□□ -0.28
USP43-202ENST00000570475 C9orf152Q5JTZ5 239 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 TCEAL6Q6IPX3 200 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 C17orf82Q86X59 251 aaPredicted RBP13.29□□□□□ -0.28
USP43-202ENST00000570475 MCEMP1Q8IX19 187 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 CACFD1Q9UGQ2 172 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 IGKV1-27A0A075B6S5 117 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 A0A0G2JMM0 328 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 A0A1W2PPB8 328 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 A0A1W2PRS3 328 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 KIR3DP1A8MWS1 328 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 VAMP5O95183 116 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 PPYP01298 95 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 SCTP09683 121 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 RPS2P15880 293 aaKnown RBP13.29□□□□□ -0.28
USP43-202ENST00000570475 S100GP29377 79 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 CLDN15P56746 228 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 TBC1D26Q86UD7 250 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 CALHM1Q8IU99 346 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 CMTM1Q8IZ96 169 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 GAPTQ8N292 157 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 OR1J1Q8NGS3 322 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 SCGB1C1Q8TD33 95 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 H0YL77 283 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 IFNA5P01569 189 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 SNCAP37840 140 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 PSG4Q00888 419 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 SLC23A3Q6PIS1 610 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 CCL28Q9NRJ3 127 aa13.29□□□□□ -0.28
USP43-202ENST00000570475 PPP1R3CQ9UQK1 317 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms