RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CDNFQ49AH0 187 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PLAC9Q5JTB6 97 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 TEX36Q5VZQ5 186 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 SIGIRRQ6IA17 410 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 Q6P435 159 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 Q6ZTK2 550 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 OR5T2Q8NGG2 359 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PECRQ9BY49 303 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 AUNIPQ9H7T9 357 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 ZMAT3Q9HA38 289 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 SPACA1Q9HBV2 294 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PLEKHJ1Q9NW61 149 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PPIAL4AQ9Y536 164 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 ITPR2Q14571 2701 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 TRAV38-1A0A0B4J264 116 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 J3QRK9 145 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 MFNGO00587 321 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 HSPB6O14558 160 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 TFF1P04155 84 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 PSG2P11465 335 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 MUC1P15941 1255 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 FUT3P21217 361 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 GABRA2P47869 451 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 KRTAP10-9P60411 292 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF260Q3ZCT1 412 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 RNASE12Q5GAN4 147 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 C6orf201Q7Z4U5 140 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 NEK7Q8TDX7 302 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 C15orf40Q8WUR7 153 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 GCDHQ92947 438 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 SRRQ9GZT4 340 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 IFT22Q9H7X7 185 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 RCC2Q9P258 522 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
HERPUD1-219ENST00000570273 DYSFO75923 2080 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 APCP25054 2843 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 TPPPO94811 219 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 GYPAP02724 150 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 GSTP1P09211 210 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 PTHLHP12272 177 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 PRDX2P32119 198 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 BTG1P62324 171 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 COL10A1Q03692 680 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 ARL6IP1Q15041 203 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 STUMQ69YW2 141 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 PEG10Q86TG7 708 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 SUMF2Q8NBJ7 301 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 TIMD4Q96H15 378 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 CYYR1Q96J86 154 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 ABHD1Q96SE0 405 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF222Q9UK12 451 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 HSF4Q9ULV5 492 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 TACC2O95359 2948 aa12.91□□□□□ -0.34
HERPUD1-219ENST00000570273 AKAP6Q13023 2319 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 TRAV24A0A0B4J272 114 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ISPDA4D126 451 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 MCRIP1C9JLW8 97 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 SLC33A1O00400 549 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 PPIHO43447 177 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ATP5J2P56134 94 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 GNG2P59768 71 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 AVPI1Q5T686 147 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 OLFML2AQ68BL7 652 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ST8SIA4Q92187 359 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 METRNQ9UJH8 293 aa12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-219ENST00000570273 USF3Q68DE3 2245 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 CTDSPLO15194 276 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 CD40LGP29965 261 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 PRSS3P35030 304 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 MDH2P40926 338 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 PPP5CP53041 499 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 MRPS10P82664 201 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 DGCR2P98153 550 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 KCNJ8Q15842 424 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
HERPUD1-219ENST00000570273 Q8N402 240 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms