RNA–Protein interactions for RNA: ENST00000569950.1

VPS35-211, Transcript of VPS35, retromer complex component, humanhuman

TSL 5

Gene VPS35, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-211ENST00000569950 STEAP1Q9UHE8 339 aa7.7□□□□□ -1.18
VPS35-211ENST00000569950 ING4Q9UNL4 249 aa7.7□□□□□ -1.18
VPS35-211ENST00000569950 GSTK1Q9Y2Q3 226 aa7.7□□□□□ -1.18
VPS35-211ENST00000569950 NAV3Q8IVL0 2385 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 HIVEP2P31629 2446 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 ISPDA4D126 451 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 K7N7A8 449 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 SLC33A1O00400 549 aaPredicted RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 DVL1O14640 695 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 PHF1O43189 567 aaPredicted RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 ADAM20O43506 726 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 HTR3BO95264 441 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 OR2H2O95918 312 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 HAND1O96004 215 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 OCMP0CE72 109 aaPredicted RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 SNRPBP14678 240 aaKnown RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 RPS2P15880 293 aaKnown RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 SERPINA2P20848 420 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 SNU13P55769 128 aaKnown RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 TMEM50BP56557 158 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 COL10A1Q03692 680 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 IL13RA2Q14627 380 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 RSU1Q15404 277 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 RAB11BQ15907 218 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 TAF9Q16594 264 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 PEG10Q86TG7 708 aaKnown RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 OSR2Q8N2R0 312 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 SPICQ8N5J4 248 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 OR4S1Q8NGB4 309 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 DYNC2LI1Q8TCX1 351 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 RAB2BQ8WUD1 216 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 FAM46BQ96A09 425 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 NEIL1Q96FI4 390 aaPredicted RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 CPNE2Q96FN4 548 aaPredicted RBP7.69□□□□□ -1.18
VPS35-211ENST00000569950 COQ2Q96H96 371 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 BCL7BQ9BQE9 202 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 METTL9Q9H1A3 318 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 DCSTAMPQ9H295 470 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 LIN7BQ9HAP6 207 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 NEK6Q9HC98 313 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 DNAJB11Q9UBS4 358 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 GHRLQ9UBU3 117 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 MIOXQ9UGB7 285 aa7.69□□□□□ -1.18
VPS35-211ENST00000569950 A6NHS1 94 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 RAB27BO00194 218 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 PDCD5O14737 125 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 SMAD7O15105 426 aaKnown RBP7.68□□□□□ -1.18
VPS35-211ENST00000569950 TMPRSS2O15393 492 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 NDUFA2O43678 99 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 UBBP0CG47 229 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 CHATP28329 748 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 SERPINB10P48595 397 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 PITPNBP48739 271 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 IL13RA1P78552 427 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 MOGAT2Q3SYC2 334 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 OR2W3Q7Z3T1 314 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 GAPTQ8N292 157 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 C11orf42Q8N5U0 333 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 PNLDC1Q8NA58 520 aaKnown RBP7.68□□□□□ -1.18
VPS35-211ENST00000569950 LY6G5BQ8NDX9 201 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 PLPPR1Q8TBJ4 325 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 LGALS14Q8TCE9 139 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 MRPS24Q96EL2 167 aaKnown RBP7.68□□□□□ -1.18
VPS35-211ENST00000569950 C18orf12Q96KH6 178 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 MRI1Q9BV20 369 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 PLGRKTQ9HBL7 147 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 OR14J1Q9UGF5 321 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 DAPK2Q9UIK4 370 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 ST3GAL6Q9Y274 331 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 KCNK7Q9Y2U2 307 aa7.68□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A18PA6NE21 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A16PA6NEW6 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A20PA6NIJ5 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A8PA6NJQ4 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A22PA8MWA6 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A12PA8MX19 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A5PA8MXJ8 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A23PA8MXZ1 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 ZNF701M0R085 212 aaPredicted RBP7.67□□□□□ -1.18
VPS35-211ENST00000569950 SIRPB1O00241 398 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 SOCS1O15524 211 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 ZNF780AO75290 641 aaPredicted RBP7.67□□□□□ -1.18
VPS35-211ENST00000569950 CRTAPO75718 401 aaPredicted RBP7.67□□□□□ -1.18
VPS35-211ENST00000569950 MPIG6BO95866 241 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 CYB5AP00167 134 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 AVPP01185 164 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 TK1P04183 234 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 CHRM2P08172 466 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 GTF2F2P13984 249 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 ARSBP15848 533 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 CPT2P23786 658 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 GABRA2P47869 451 aa7.67□□□□□ -1.18
VPS35-211ENST00000569950 PSMD7P51665 324 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms