RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SFRP4Q6FHJ7 346 aaPredicted RBP9.02□□□□□ -0.97
CDH3-208ENST00000569036 KCTD18Q6PI47 426 aaPredicted RBP9.02□□□□□ -0.97
CDH3-208ENST00000569036 ZNF322Q6U7Q0 402 aaPredicted RBP9.02□□□□□ -0.97
CDH3-208ENST00000569036 KCTD20Q7Z5Y7 419 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 MS4A15Q8N5U1 240 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 OR11L1Q8NGX0 322 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 OR13G1Q8NGZ3 307 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 NABP1Q96AH0 204 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 OR2H1Q9GZK4 316 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 HEXA-AS1Q9H8Q6 139 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 CYB5R1Q9UHQ9 305 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 MUC4Q99102 2169 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 HERC1Q15751 4861 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 TRAV1-2A0A0B4J238 106 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 I3L521 148 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 AKR7A2O43488 359 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 RNF13O43567 381 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 OR5F1O95221 314 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 TCRBP04435 133 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 NR2F1P10589 423 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 NAT1P18440 290 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 TUBG1P23258 451 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 MAPK3P27361 379 aaPredicted RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 VEGFCP49767 419 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 ACTC1P68032 377 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 ACTA1P68133 377 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 MRPS34P82930 218 aaKnown RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 POU4F2Q12837 409 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 GALEQ14376 348 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 P2RY14Q15391 338 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 FCN2Q15485 313 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 HIST3H3Q16695 136 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 OVCH2Q7RTZ1 564 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 EIF4E3Q8N5X7 224 aaKnown RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 OR8G5Q8NG78 346 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 ACOT11Q8WXI4 607 aaPredicted RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 MRPL48Q96GC5 212 aaKnown RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 PPIL3Q9H2H8 161 aaKnown RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 NANSQ9NR45 359 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 TUBG2Q9NRH3 451 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
CDH3-208ENST00000569036 RPS6KB2Q9UBS0 482 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 SLC13A4Q9UKG4 626 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 BAIAP2Q9UQB8 552 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 SMAD5-AS1Q9Y6J3 95 aa9.01□□□□□ -0.97
CDH3-208ENST00000569036 TEX13CA0A0J9YWL9 993 aa9□□□□□ -0.97
CDH3-208ENST00000569036 A0A1B0GWA3 101 aa9□□□□□ -0.97
CDH3-208ENST00000569036 J3QRE1 110 aa9□□□□□ -0.97
CDH3-208ENST00000569036 F2RL2O00254 374 aa9□□□□□ -0.97
CDH3-208ENST00000569036 SULT1B1O43704 296 aa9□□□□□ -0.97
CDH3-208ENST00000569036 SC5DO75845 299 aa9□□□□□ -0.97
CDH3-208ENST00000569036 RGS11O94810 467 aa9□□□□□ -0.97
CDH3-208ENST00000569036 IGHG1P01857 330 aa9□□□□□ -0.97
CDH3-208ENST00000569036 GYPAP02724 150 aa9□□□□□ -0.97
CDH3-208ENST00000569036 ALDOBP05062 364 aa9□□□□□ -0.97
CDH3-208ENST00000569036 GIPP09681 153 aaPredicted RBP9□□□□□ -0.97
CDH3-208ENST00000569036 RAC2P15153 192 aa9□□□□□ -0.97
CDH3-208ENST00000569036 ELK1P19419 428 aa9□□□□□ -0.97
CDH3-208ENST00000569036 PAICSP22234 425 aaKnown RBP9□□□□□ -0.97
CDH3-208ENST00000569036 PRKAR1BP31321 381 aa9□□□□□ -0.97
CDH3-208ENST00000569036 BTCP35070 178 aa9□□□□□ -0.97
CDH3-208ENST00000569036 MNDAP41218 407 aa9□□□□□ -0.97
CDH3-208ENST00000569036 THBS3P49746 956 aa9□□□□□ -0.97
CDH3-208ENST00000569036 MECP2P51608 486 aaKnown RBP9□□□□□ -0.97
CDH3-208ENST00000569036 LUMP51884 338 aaPredicted RBP9□□□□□ -0.97
CDH3-208ENST00000569036 CLRN1P58418 232 aa9□□□□□ -0.97
CDH3-208ENST00000569036 NCR3LG1Q68D85 454 aa9□□□□□ -0.97
CDH3-208ENST00000569036 SMARCD3Q6STE5 483 aa9□□□□□ -0.97
CDH3-208ENST00000569036 TMEM219Q86XT9 240 aa9□□□□□ -0.97
CDH3-208ENST00000569036 OR8H3Q8N146 312 aa9□□□□□ -0.97
CDH3-208ENST00000569036 TOMM5Q8N4H5 51 aa9□□□□□ -0.97
CDH3-208ENST00000569036 ACBD7Q8N6N7 88 aa9□□□□□ -0.97
CDH3-208ENST00000569036 BOLLQ8N9W6 283 aaKnown RBP9□□□□□ -0.97
CDH3-208ENST00000569036 NOXO1Q8NFA2 376 aa9□□□□□ -0.97
CDH3-208ENST00000569036 OR2T33Q8NG76 320 aa9□□□□□ -0.97
CDH3-208ENST00000569036 HAVCR2Q8TDQ0 301 aa9□□□□□ -0.97
CDH3-208ENST00000569036 RBPMSQ93062 196 aaKnown RBP9□□□□□ -0.97
CDH3-208ENST00000569036 ZNF649Q9BS31 505 aa9□□□□□ -0.97
CDH3-208ENST00000569036 IFT27Q9BW83 186 aa9□□□□□ -0.97
CDH3-208ENST00000569036 ZCCHC4Q9H5U6 513 aa9□□□□□ -0.97
CDH3-208ENST00000569036 UFSP2Q9NUQ7 469 aa9□□□□□ -0.97
CDH3-208ENST00000569036 BABAM2Q9NXR7 383 aa9□□□□□ -0.97
CDH3-208ENST00000569036 RHCGQ9UBD6 479 aa9□□□□□ -0.97
CDH3-208ENST00000569036 hCG_1807616A0A1W2PRN6 198 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 NKX6-3A6NJ46 265 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 SNRPGP15A8MWD9 76 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 NDUFA2O43678 99 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 B3GALNT1O75752 331 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 GATBO75879 557 aaKnown RBP8.99□□□□□ -0.97
CDH3-208ENST00000569036 ARL6IP5O75915 188 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 H2AFB2P0C5Z0 115 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 CELP19835 753 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 HTR2AP28223 471 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 ECI1P42126 302 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 SCAND1P57086 179 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 RAP2BP61225 183 aa8.99□□□□□ -0.97
CDH3-208ENST00000569036 EXOSC2Q13868 293 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms