RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 NFYBP25208 207 aa12.61□□□□□ -0.39
CLK3-223ENST00000568488 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
CLK3-223ENST00000568488 C8orf82Q6P1X6 216 aaPredicted RBP12.61□□□□□ -0.39
CLK3-223ENST00000568488 RNF148Q8N7C7 305 aa12.61□□□□□ -0.39
CLK3-223ENST00000568488 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
CLK3-223ENST00000568488 EFCAB1Q9HAE3 211 aa12.61□□□□□ -0.39
CLK3-223ENST00000568488 DNAJB9Q9UBS3 223 aa12.61□□□□□ -0.39
CLK3-223ENST00000568488 SIRPB1O00241 398 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 KRT36O76013 467 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 CCNB2O95067 398 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 ALOX5APP20292 161 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
CLK3-223ENST00000568488 GPR12P47775 334 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 OR3A1P47881 315 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 PPP1R8Q12972 351 aaKnown RBP12.6□□□□□ -0.39
CLK3-223ENST00000568488 UTF1Q5T230 341 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 IQCF1Q8N6M8 205 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 MROQ9BYG7 248 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 ING3Q9NXR8 418 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 TAS2R3Q9NYW6 316 aa12.6□□□□□ -0.39
CLK3-223ENST00000568488 AMMECR1Q9Y4X0 333 aaPredicted RBP12.6□□□□□ -0.39
CLK3-223ENST00000568488 OVOL1O14753 267 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 IGHV3-7P01780 117 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 IFNA6P05013 189 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 PTGFRP43088 359 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 GLIPR1P48060 266 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 PSME3P61289 254 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 ZNF91Q05481 1191 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 GABPB1Q06547 395 aaPredicted RBP12.59□□□□□ -0.39
CLK3-223ENST00000568488 AESQ08117 197 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 SLC25A26Q70HW3 274 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 ENTHD1Q8IYW4 607 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 OR9G1Q8NH87 305 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 CORO2AQ92828 525 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 TTTY10Q9BZA0 68 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 NUFIP1Q9UHK0 495 aaKnown RBP12.59□□□□□ -0.39
CLK3-223ENST00000568488 KIAA2026Q5HYC2 2103 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 RYR1P21817 5038 aa12.59□□□□□ -0.39
CLK3-223ENST00000568488 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 FUOMA2VDF0 154 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 TTRP02766 147 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 IGHV4-30-4P0DP06 118 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 VDAC1P21796 283 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 HMGA2P52926 109 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 RPS7P62081 194 aaKnown RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 MFGE8Q08431 387 aaPredicted RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 DIAPH2-AS1Q14236 149 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 ZNF829Q3KNS6 432 aaPredicted RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 OR14K1Q8NGZ2 314 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 ST6GALNAC6Q969X2 333 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 SPATA25Q9BR10 227 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 RBFOX1Q9NWB1 397 aaKnown RBP12.58□□□□□ -0.4
CLK3-223ENST00000568488 ABCD2Q9UBJ2 740 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 V9GYS6 101 aa12.58□□□□□ -0.4
CLK3-223ENST00000568488 SLC25A17O43808 307 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 NPBWR2P48146 333 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 ASPHD1Q5U4P2 390 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
CLK3-223ENST00000568488 DEGS2Q6QHC5 323 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 OR6Q1Q8NGQ2 317 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 CCDC134Q9H6E4 229 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 GNB4Q9HAV0 340 aa12.57□□□□□ -0.4
CLK3-223ENST00000568488 SEBOXQ9HB31 216 aaPredicted RBP12.57□□□□□ -0.4
CLK3-223ENST00000568488 IGKV1-27A0A075B6S5 117 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 A0A087X0M5 115 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 A0A1B0GX30 115 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 H3BN98 237 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 J3QR06 171 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 IGHG4P01861 327 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 PRKACAP17612 351 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 RAB7AP51149 207 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 RIDAP52758 137 aaKnown RBP12.56□□□□□ -0.4
CLK3-223ENST00000568488 MADCAM1Q13477 382 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 HACD2Q6Y1H2 254 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 MOB3BQ86TA1 216 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 IL17DQ8TAD2 202 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
CLK3-223ENST00000568488 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
CLK3-223ENST00000568488 IGHV3-72A0A0B4J1Y9 119 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 A0A1B0GTI1 187 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 ODAMA1E959 279 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 LOC110117498-PIK3R3F6TDL0 507 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 ZNF254O75437 659 aa12.55□□□□□ -0.4
CLK3-223ENST00000568488 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
CLK3-223ENST00000568488 BCL3P20749 454 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms