RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 SLC25A26Q70HW3 274 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 GJC3Q8NFK1 279 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 M1APQ8TC57 530 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
PALB2-206ENST00000568219 SMIM10Q96HG1 83 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 PRRG4Q9BZD6 226 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 C3orf85A0A1B0GTC6 90 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 FOXS1O43638 330 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 TCF21O43680 179 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 KRTDAPP60985 99 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 PAX5Q02548 391 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 TGFBR3Q03167 851 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 DEGS2Q6QHC5 323 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 DTD1Q8TEA8 209 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 PTX4Q96A99 478 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 PCGF1Q9BSM1 259 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 WFDC1Q9HC57 220 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
PALB2-206ENST00000568219 OR6C6A6NF89 314 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 CBY3A6NI87 242 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 RABIFP47224 123 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 ZXDAP98168 799 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 BAXQ07812 192 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 IL13RA2Q14627 380 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 PIGYQ3MUY2 71 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 UNQ6494/PRO21346Q6UXR6 183 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 SLC25A22Q9H936 323 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 P4HTMQ9NXG6 502 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 HS3ST3B1Q9Y662 390 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 FNDC1Q4ZHG4 1894 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 NLRC5Q86WI3 1866 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 TUSC2O75896 110 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 FAM3BP58499 235 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 STARD6P59095 220 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 DCAF7P61962 342 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 PTPMT1Q8WUK0 201 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 HINT2Q9BX68 163 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 SEBOXQ9HB31 216 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 IGKV1D-8A0A087WSZ0 117 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 A0A1W2PPV4 95 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 PLRG1O43660 514 aaKnown RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 SELLP14151 372 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 HNRNPKP61978 463 aaKnown RBP eCLIP9.56□□□□□ -0.88
PALB2-206ENST00000568219 ELOBQ15370 118 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 ASPHD2Q6ICH7 369 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 TMEM252Q8N6L7 170 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 C8orf33Q9H7E9 229 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 STARD10Q9Y365 291 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 TMED3Q9Y3Q3 217 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 PIAS3Q9Y6X2 628 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 XIRP2A4UGR9 3374 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 IGHV5-51A0A0C4DH38 117 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 TMEM14DPA8MWL7 114 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 FUT7Q11130 342 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 CNN3Q15417 329 aaKnown RBP9.56□□□□□ -0.88
PALB2-206ENST00000568219 BSXQ3C1V8 233 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 LRRC75AQ8NAA5 344 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 GNRHR2Q96P88 292 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 TUBA4BQ9H853 241 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 SERTAD4Q9NUC0 356 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 KIAA1456Q9P272 454 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 WNT16Q9UBV4 365 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 PRSS50Q9UI38 385 aa9.56□□□□□ -0.88
PALB2-206ENST00000568219 UBE2L5PA0A1B0GUS4 154 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 FRG2CA6NGY1 282 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ZNF737O75373 536 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 HBG1P69891 147 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 HBG2P69892 147 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ZNF574Q6ZN55 896 aaPredicted RBP9.55□□□□□ -0.88
PALB2-206ENST00000568219 LIPHQ8WWY8 451 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 MUCL1Q96DR8 90 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 TAAR9Q96RI9 348 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 RNF122Q9H9V4 155 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 GCM1Q9NP62 436 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 DOCK11Q5JSL3 2073 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 MAP1LC3B2A6NCE7 125 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 OPN1MWP04001 364 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 OPN1MW2P0DN77 364 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 OPN1MW3P0DN78 364 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 NTF3P20783 257 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 SPCS3P61009 180 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 GKN2Q86XP6 184 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 MRGPRX1Q96LB2 322 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 TBX15Q96SF7 602 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 PLA2G2FQ9BZM2 168 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 MAP1LC3BQ9GZQ8 125 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 PLA2G3Q9NZ20 509 aa9.55□□□□□ -0.88
PALB2-206ENST00000568219 ZSWIM8A7E2V4 1837 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms