RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 SGCDQ92629 289 aa12.87□□□□□ -0.35
CDH11-213ENST00000567934 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
CDH11-213ENST00000567934 CDCA4Q9BXL8 241 aa12.87□□□□□ -0.35
CDH11-213ENST00000567934 PAK1IP1Q9NWT1 392 aaPredicted RBP12.87□□□□□ -0.35
CDH11-213ENST00000567934 RAB26Q9ULW5 256 aa12.87□□□□□ -0.35
CDH11-213ENST00000567934 TMEM82A0PJX8 343 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 DEGS1O15121 323 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 ZNF737O75373 536 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 HTR3BO95264 441 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 CSTBP04080 98 aaKnown RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 HSMCR30P0CW71 290 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 CCL3L1P16619 93 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 PRTN3P24158 256 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 MAPK3P27361 379 aaPredicted RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 MTNR1BP49286 362 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 RPS11P62280 158 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH11-213ENST00000567934 BDH1Q02338 343 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 ASPHD2Q6ICH7 369 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 METAP1DQ6UB28 335 aaPredicted RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 PXT1Q8NFP0 134 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 THRSPQ92748 146 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 GCDHQ92947 438 aaPredicted RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 ZNF184Q99676 751 aaPredicted RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 Q9H521 79 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 BLOC1S6Q9UL45 172 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
CDH11-213ENST00000567934 COL6A5A8TX70 2615 aa12.86□□□□□ -0.35
CDH11-213ENST00000567934 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 MGST3O14880 152 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 NPFFO15130 113 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
CDH11-213ENST00000567934 OR2H2O95918 312 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 PAHP00439 452 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 MAS1P04201 325 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 CD1AP06126 327 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 PTGFRP43088 359 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 OR3A4PP47883 348 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 ZNF273Q14593 569 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 RBM48Q5RL73 367 aaKnown RBP12.85□□□□□ -0.35
CDH11-213ENST00000567934 CRIP3Q6Q6R5 217 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 JAGN1Q8N5M9 183 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 TPRX1Q8N7U7 411 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 OR10K1Q8NGX5 313 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 METTL9Q9H1A3 318 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 HEXA-AS1Q9H8Q6 139 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
CDH11-213ENST00000567934 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 MEIOCA2RUB1 952 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 FUOMA2VDF0 154 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 PSPNO60542 156 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 CDRT1O95170 752 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 IGFBP3P17936 291 aaPredicted RBP12.84□□□□□ -0.35
CDH11-213ENST00000567934 CRHBPP24387 322 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 UBE2E1P51965 193 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 MEF2CQ06413 473 aaPredicted RBP12.84□□□□□ -0.35
CDH11-213ENST00000567934 ACSM1Q08AH1 577 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 Q6YL49 198 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 PNKDQ8N490 385 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 MS4A15Q8N5U1 240 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 UFD1Q92890 307 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 PPA2Q9H2U2 334 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 PCDHB16Q9NRJ7 776 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 FOXJ3Q9UPW0 622 aa12.84□□□□□ -0.35
CDH11-213ENST00000567934 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
CDH11-213ENST00000567934 TRAV8-7A0A075B6U6 113 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 TRBV5-7A0A0A0MS05 114 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 GPX5O75715 221 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 FBP1P09467 338 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 FSTP19883 344 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 SERPINA2P20848 420 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 COX7A1P24310 79 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 OR3A1P47881 315 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 LGALS4P56470 323 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 DOC2BQ14184 412 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 IRF3Q14653 427 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 ACSM3Q53FZ2 586 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 ELP2Q6IA86 826 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
CDH11-213ENST00000567934 PRSS48Q7RTY5 328 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 CHST4Q8NCG5 386 aa12.83□□□□□ -0.36
CDH11-213ENST00000567934 TNFRSF14Q92956 283 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms