RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ATP5HO75947 161 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 APOL3O95236 402 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 MT-ND2P03891 347 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 PRKACAP17612 351 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 BCL3P20749 454 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 DUSP1P28562 367 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 CD34P28906 385 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 KIR3DL2P43630 455 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 CCR9P51686 369 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 ARHGDIBP52566 201 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 TP53I3Q53FA7 332 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 TPRX1Q8N7U7 411 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 OR5AU1Q8NGC0 362 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 OR4P4Q8NGL7 312 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 CREB3L1Q96BA8 519 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 FGGYQ96C11 551 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
RNF40-209ENST00000566703 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 MBOAT4Q96T53 435 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 CHST6Q9GZX3 395 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 NEK6Q9HC98 313 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 GNG8Q9UK08 70 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 PCDHGB5Q9Y5G0 923 aa12.02□□□□□ -0.49
RNF40-209ENST00000566703 LEUTXA8MZ59 168 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 MMP23AO75900 390 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 CSN2P05814 226 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 RPSAP08865 295 aaKnown RBP12.01□□□□□ -0.49
RNF40-209ENST00000566703 OR3A1P47881 315 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 POU3F4P49335 361 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 TRAPPC6BQ86SZ2 158 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 SAXO1Q8IYX7 474 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 MRAPQ8TCY5 172 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 CAPSLQ8WWF8 208 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 SGCDQ92629 289 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 STMN2Q93045 179 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 OPALINQ96PE5 141 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 COMMD4Q9H0A8 199 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 RIBC2Q9H4K1 309 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 EXOSC4Q9NPD3 245 aaKnown RBP12.01□□□□□ -0.49
RNF40-209ENST00000566703 FRRS1LQ9P0K9 344 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
RNF40-209ENST00000566703 OOSP1A8MZH6 123 aa12□□□□□ -0.49
RNF40-209ENST00000566703 J3QRE1 110 aa12□□□□□ -0.49
RNF40-209ENST00000566703 KDM4BO94953 1096 aa12□□□□□ -0.49
RNF40-209ENST00000566703 IGLV1-47P01700 117 aa12□□□□□ -0.49
RNF40-209ENST00000566703 PRB2P02812 416 aaPredicted RBP12□□□□□ -0.49
RNF40-209ENST00000566703 OCM2P0CE71 109 aa12□□□□□ -0.49
RNF40-209ENST00000566703 OCMP0CE72 109 aaPredicted RBP12□□□□□ -0.49
RNF40-209ENST00000566703 ZNF20P17024 532 aa12□□□□□ -0.49
RNF40-209ENST00000566703 CEACAM3P40198 252 aa12□□□□□ -0.49
RNF40-209ENST00000566703 C1orf146Q5VVC0 180 aa12□□□□□ -0.49
RNF40-209ENST00000566703 MEDAGQ5VYS4 303 aa12□□□□□ -0.49
RNF40-209ENST00000566703 CENPVQ7Z7K6 275 aaPredicted RBP12□□□□□ -0.49
RNF40-209ENST00000566703 CHST4Q8NCG5 386 aa12□□□□□ -0.49
RNF40-209ENST00000566703 PHF21AQ96BD5 680 aa12□□□□□ -0.49
RNF40-209ENST00000566703 MYCBPQ99417 103 aaPredicted RBP12□□□□□ -0.49
RNF40-209ENST00000566703 HHLA2Q9UM44 414 aa12□□□□□ -0.49
RNF40-209ENST00000566703 GSTK1Q9Y2Q3 226 aa12□□□□□ -0.49
RNF40-209ENST00000566703 A0A087X0M5 115 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 A0A1B0GX30 115 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 DAPL1A0PJW8 107 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 SLC16A6O15403 523 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 ALX3O95076 343 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 OR2H2O95918 312 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 HTR1AP08908 422 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 CD33P20138 364 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 CDK2P24941 298 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 PRRX1P54821 245 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 SNRPGP62308 76 aaKnown RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 KPNB1Q14974 876 aaKnown RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 MRPL48Q96GC5 212 aaKnown RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 HRASLS5Q96KN8 279 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 RBM14Q96PK6 669 aaKnown RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 IMPAD1Q9NX62 359 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 OAZ3Q9UMX2 235 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
RNF40-209ENST00000566703 DSCAML1Q8TD84 2053 aa11.99□□□□□ -0.49
RNF40-209ENST00000566703 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 ODAMA1E959 279 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 SNTNA6NMZ2 147 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 M0QZK8 103 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 SIRPB1O00241 398 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 DYNC1I1O14576 645 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 TOR1AO14656 332 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 OR2F2O95006 317 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 CALCBP10092 127 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 DBTP11182 482 aaKnown RBP11.98□□□□□ -0.49
RNF40-209ENST00000566703 GLIPR1P48060 266 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 NANOS3P60323 173 aaKnown RBP11.98□□□□□ -0.49
RNF40-209ENST00000566703 AESQ08117 197 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 CCDC144NLQ6NUI1 221 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 ACBD7Q8N6N7 88 aa11.98□□□□□ -0.49
RNF40-209ENST00000566703 OR4D6Q8NGJ1 314 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms