RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 MUCL1Q96DR8 90 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 REEP6Q96HR9 211 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 SPSB2Q99619 263 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 ULBP2Q9BZM5 246 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 MIOXQ9UGB7 285 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 NXT1Q9UKK6 140 aaKnown RBP18.73■□□□□ 0.59
SPSB3-208ENST00000566339 RARRES3Q9UL19 164 aa18.73■□□□□ 0.59
SPSB3-208ENST00000566339 FAM230AA0A1W2PPH8 454 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 GJE1A6NN92 205 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 PPIHO43447 177 aaKnown RBP18.72■□□□□ 0.59
SPSB3-208ENST00000566339 HSPB1P04792 205 aaKnown RBP18.72■□□□□ 0.59
SPSB3-208ENST00000566339 DSCR4P56555 118 aaPredicted RBP18.72■□□□□ 0.59
SPSB3-208ENST00000566339 MALLQ13021 153 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 SLC22A25Q6T423 547 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 LINC00469Q8N7U9 141 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 OR52M1Q8NGK5 317 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 OR13D1Q8NGV5 346 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 FAM213BQ8TBF2 198 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 RBMXL1Q96E39 390 aaKnown RBP18.72■□□□□ 0.59
SPSB3-208ENST00000566339 PAPOLGQ9BWT3 736 aaKnown RBP18.72■□□□□ 0.59
SPSB3-208ENST00000566339 FBXO7Q9Y3I1 522 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 ASXL3Q9C0F0 2248 aa18.72■□□□□ 0.59
SPSB3-208ENST00000566339 CCDC187A0A096LP49 1063 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 hCG_1809904A0A1W2PP81 198 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 A0A1W2PR64 198 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 A0A1W2PRV1 198 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 PHF1O43189 567 aaPredicted RBP18.71■□□□□ 0.59
SPSB3-208ENST00000566339 SYNGR3O43761 229 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 SCRG1O75711 98 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 CD81P60033 236 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 TCF15Q12870 199 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 WDR5BQ86VZ2 330 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 Q8NFD4 153 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 OR10AD1Q8NGE0 317 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 TMEM222Q9H0R3 208 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 LYRM2Q9NU23 88 aaPredicted RBP18.71■□□□□ 0.59
SPSB3-208ENST00000566339 SLC7A11Q9UPY5 501 aa18.71■□□□□ 0.59
SPSB3-208ENST00000566339 C3orf85A0A1B0GTC6 90 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 B4DEV8 164 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 MPPED1O15442 326 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 YKT6O15498 198 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 XRCC2O43543 280 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OPN1LWP04000 364 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 CBR1P16152 277 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 NKX2-1P43699 371 aaPredicted RBP18.7■□□□□ 0.58
SPSB3-208ENST00000566339 HTR5AP47898 357 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 CDX1P47902 265 aaPredicted RBP18.7■□□□□ 0.58
SPSB3-208ENST00000566339 NHLH2Q02577 135 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OR8G1Q15617 311 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 SNAI3Q3KNW1 292 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 TMEM182Q6ZP80 229 aaPredicted RBP18.7■□□□□ 0.58
SPSB3-208ENST00000566339 HSD17B11Q8NBQ5 300 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OR1F12Q8NHA8 337 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 IL22RA2Q969J5 263 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 RBM24Q9BX46 236 aaKnown RBP18.7■□□□□ 0.58
SPSB3-208ENST00000566339 TOLLIPQ9H0E2 274 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 SH3BGRL3Q9H299 93 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 LOC102723996A0A087X1L8 192 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 A0A1W2PPE2 198 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 F10P00742 488 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 NRASP01111 189 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 NQO2P16083 231 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 TCN2P20062 427 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OPRM1P35372 400 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 RRADP55042 308 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 NHLH1Q02575 133 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 FOXO1Q12778 655 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF506Q5JVG8 444 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 FAM209BQ5JX69 171 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 SLC25A45Q8N413 288 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 SLC35G3Q8N808 338 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OR2G3Q8NGZ4 309 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 DNASE2BQ8WZ79 361 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 FBXO17Q96EF6 278 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 PARP12Q9H0J9 701 aaKnown RBP18.7■□□□□ 0.58
SPSB3-208ENST00000566339 OPA3Q9H6K4 179 aa18.7■□□□□ 0.58
SPSB3-208ENST00000566339 WDR87Q6ZQQ6 2873 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 UNC13CQ8NB66 2214 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 FUT3P21217 361 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 PPP1CCP36873 323 aaKnown RBP18.69■□□□□ 0.58
SPSB3-208ENST00000566339 FXYD4P59646 89 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 PHLDA2Q53GA4 152 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 SPSB3Q6PJ21 355 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 SLC35E3Q7Z769 313 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 DTX1Q86Y01 620 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 OR5L1Q8NGL2 311 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 CPT1CQ8TCG5 803 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 ZNF385AQ96PM9 386 aaKnown RBP18.69■□□□□ 0.58
SPSB3-208ENST00000566339 WDR54Q9H977 334 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 SIT1Q9Y3P8 196 aa18.69■□□□□ 0.58
SPSB3-208ENST00000566339 IGKV1-27A0A075B6S5 117 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 OR6C6A6NF89 314 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 PPYP01298 95 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 ARG1P05089 322 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 SRP19P09132 144 aaKnown RBP18.68■□□□□ 0.58
SPSB3-208ENST00000566339 ATP6V0CP27449 155 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 FHITP49789 147 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 RAC1P63000 192 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 CHAF1BQ13112 559 aa18.68■□□□□ 0.58
SPSB3-208ENST00000566339 DPPA2Q7Z7J5 298 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms