RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SNNO75324 88 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 STX11O75558 287 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 BCAS2O75934 225 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 DIRAS1O95057 198 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SYNGR4O95473 234 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PNPP00491 289 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TGFAP01135 160 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 HLA-HP01893 362 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OPN1SWP03999 348 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SERPINE1P05121 402 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 BCHEP06276 602 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ABHD2P08910 425 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ADRA2AP08913 450 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR4A8P0C604 315 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CD79AP11912 226 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GABRA1P14867 456 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 HPGDP15428 266 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NCK1P16333 377 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GGT1P19440 569 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PRPS1L1P21108 318 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ATP6V1C1P21283 382 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CCNOP22674 350 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CRYGSP22914 178 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 AHCYP23526 432 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CXCR1P25024 350 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PAX6P26367 422 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GRPRP30550 384 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 AGTR1P30556 359 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SERPINB1P30740 379 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CALCRP30988 508 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 S100A3P33764 101 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CD79BP40259 229 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 AQP2P41181 271 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 KIR2DS2P43631 304 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ASMTP46597 345 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 RPS5P46782 204 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 GZMMP51124 257 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 IDH3GP51553 393 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 P2RX1P51575 399 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 POLR2JP52435 117 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 HCCSP53701 268 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SLC18A1P54219 525 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CTBP2P56545 445 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MTPNP58546 118 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ERVS71-1P61550 626 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 LCN6P62502 163 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ELF3P78545 371 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 MRPS11P82912 194 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 H3F3AP84243 136 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 IL1RL1Q01638 556 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GLO1Q04760 184 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NPRL3Q12980 569 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SKP2Q13309 424 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 BIKQ13323 160 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NAB1Q13506 487 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 RCAN2Q14206 197 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MAD2L1BPQ15013 274 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 GUSBP1Q15486 140 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 RGNQ15493 299 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZNHIT3Q15649 155 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 INAQ16352 499 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GABRA6Q16445 453 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CLEC12BQ2HXU8 276 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SMU1Q2TAY7 513 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TRMT5Q32P41 509 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 SLC25A35Q3KQZ1 300 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ARHGAP11BQ3KRB8 267 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 KRTAP6-3Q3LI67 103 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CCDC153Q494R4 210 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SPIN4Q56A73 249 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 XKR7Q5GH72 579 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TNFAIP8L3Q5GJ75 292 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TMEM255AQ5JRV8 349 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FAM201AQ5SY85 155 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NCMAPQ5T1S8 102 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MRPL2Q5T653 305 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 AVPI1Q5T686 147 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PRAMEF8Q5VWM4 474 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SAXO2Q658L1 398 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TMEM225Q6GV28 225 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NANOGP8Q6NSW7 305 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NIPAL1Q6NVV3 410 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 C1orf94Q6P1W5 598 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FAHD2BQ6P2I3 314 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 NIPAL3Q6P499 406 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 EPGNQ6UW88 154 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 UGT2A3Q6UWM9 527 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 DLEU7Q6UYE1 221 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SPNS3Q6ZMD2 512 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 WDR88Q6ZMY6 472 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MSANTD1Q6ZTZ1 278 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 EIF3MQ7L2H7 374 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 BHLHA15Q7RTS1 189 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 AAED1Q7RTV5 226 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 C16orf62Q7Z3J2 963 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 VTCN1Q7Z7D3 282 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SLC22A9Q8IVM8 553 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NKAIN4Q8IVV8 208 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SKA3Q8IX90 412 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GABRG1Q8N1C3 465 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms