RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 RBMXP38159 391 aaKnown RBP6.51□□□□□ -1.37
CDH1-208ENST00000565810 MNDAP41218 407 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 NR4A2P43354 598 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 KCNJ3P48549 501 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 EFNB2P52799 333 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 IL13RA1P78552 427 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 MRPS15P82914 257 aaKnown RBP6.51□□□□□ -1.37
CDH1-208ENST00000565810 COL10A1Q03692 680 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 PDCD1Q15116 288 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 PAN3Q58A45 887 aaKnown RBP6.51□□□□□ -1.37
CDH1-208ENST00000565810 LRRC10Q5BKY1 277 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 NKAPLQ5M9Q1 402 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 ZNF788Q6ZQV5 615 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 Q6ZTK2 550 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 ZNF561Q8N587 486 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 FAM89BQ8N5H3 189 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 ASCC1Q8N9N2 400 aaKnown RBP6.51□□□□□ -1.37
CDH1-208ENST00000565810 OR8B3Q8NGG8 313 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 OR5D13Q8NGL4 314 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 OR10R2Q8NGX6 335 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 NEK7Q8TDX7 302 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 RAB39BQ96DA2 213 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 RAB3CQ96E17 227 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 SDSLQ96GA7 329 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 SNX22Q96L94 193 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 OR8B2Q96RD0 313 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 CCL13Q99616 98 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 FAM234AQ9H0X4 552 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 ABCG5Q9H222 651 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 NARFLQ9H6Q4 476 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 IFT22Q9H7X7 185 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 PLEKHJ1Q9NW61 149 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 PTTG2Q9NZH5 202 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 IL36RNQ9UBH0 155 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 KAAG1Q9UBP8 84 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 LRBAP50851 2863 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 DSCAMO60469 2012 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 VPS13CQ709C8 3753 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 IGKV1D-17A0A075B6S4 117 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 IGHV4-30-2A0A087WSY4 118 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SLC33A1O00400 549 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 GPR37O15354 613 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SIGLEC5O15389 551 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SOCS1O15524 211 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 XRCC3O43542 346 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 CLPXO76031 633 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 NDUFB7P17568 137 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 USF1P22415 310 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 LMO1P25800 156 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 NPY4RP50391 375 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 PLA2G7Q13093 441 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 GRK1Q15835 563 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 ESCO2Q56NI9 601 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 TMEM69Q5SWH9 247 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 Q6P435 159 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 DNM1P46Q6ZS02 220 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 CD177Q8N6Q3 437 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SUMF2Q8NBJ7 301 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 TMEM185AQ8NFB2 350 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 C15orf40Q8WUR7 153 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SLC25A38Q96DW6 304 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 NEIL1Q96FI4 390 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 DIRAS2Q96HU8 199 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 Q96MF0 132 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 GAFA1Q96PS6 74 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 NUDT16L1Q9BRJ7 211 aaKnown RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 NICN1Q9BSH3 213 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 DPCDQ9BVM2 203 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 PATZ1Q9HBE1 687 aaKnown RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 RABL2AQ9UBK7 228 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 EXTL2Q9UBQ6 330 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SLC25A10Q9UBX3 287 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 CLN8Q9UBY8 286 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 ZNF222Q9UK12 451 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 ITGB1BP2Q9UKP3 347 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 HSF4Q9ULV5 492 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 RABL2BQ9UNT1 228 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 MRPS7Q9Y2R9 242 aaKnown RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 MAB21L2Q9Y586 359 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 SPG11Q96JI7 2443 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 RAI1Q7Z5J4 1906 aaPredicted RBP6.5□□□□□ -1.37
CDH1-208ENST00000565810 PTPN13Q12923 2485 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 ARFGEF3Q5TH69 2177 aa6.5□□□□□ -1.37
CDH1-208ENST00000565810 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 CSMD1Q96PZ7 3565 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 TRAV18A0A075B6X5 111 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 A0A0A6YYD4 124 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 TRAV24A0A0B4J272 114 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 H7C1Q1 480 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 K7N7A8 449 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 RAB27BO00194 218 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 HSPB6O14558 160 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 DVL1O14640 695 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
CDH1-208ENST00000565810 MGST3O14880 152 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 TK1P04183 234 aa6.49□□□□□ -1.37
CDH1-208ENST00000565810 EIF4EP06730 217 aaKnown RBP6.49□□□□□ -1.37
CDH1-208ENST00000565810 GSTP1P09211 210 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms