RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 MEF2CQ06413 473 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-212ENST00000565517 GPR50Q13585 617 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 SPHARQ15513 63 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 C11orf42Q8N5U0 333 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 EXOSC4Q9NPD3 245 aaKnown RBP12.64□□□□□ -0.39
COMMD4-212ENST00000565517 FOXJ3Q9UPW0 622 aa12.64□□□□□ -0.39
COMMD4-212ENST00000565517 LSM2Q9Y333 95 aaKnown RBP12.64□□□□□ -0.39
COMMD4-212ENST00000565517 PNMA8CA0A1B0GUJ8 204 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 MGST3O14880 152 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 RGS10O43665 173 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 OR2H2O95918 312 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 RBP4P02753 201 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
COMMD4-212ENST00000565517 CALCBP10092 127 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 GABRR1P24046 479 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 MAPK3P27361 379 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF93P35789 620 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-212ENST00000565517 TGFBR2P37173 567 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 PTGFRP43088 359 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 EDDM3BP56851 147 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 DOC2BQ14184 412 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 GRK1Q15835 563 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 RBM48Q5RL73 367 aaKnown RBP12.63□□□□□ -0.39
COMMD4-212ENST00000565517 DDI2Q5TDH0 399 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 Q6P435 159 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 CDH26Q8IXH8 852 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 MS4A15Q8N5U1 240 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 OR51T1Q8NGJ9 327 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 SGCDQ92629 289 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 SLC25A28Q96A46 364 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 DERL3Q96Q80 235 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 IL36GQ9NZH8 169 aa12.63□□□□□ -0.39
COMMD4-212ENST00000565517 SF3B6Q9Y3B4 125 aaKnown RBP12.63□□□□□ -0.39
COMMD4-212ENST00000565517 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 MDFIC2A0A1B0GVS7 189 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 TMEM89A2RUT3 159 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 FUOMA2VDF0 154 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 NPFFO15130 113 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 SNU13P55769 128 aaKnown RBP12.62□□□□□ -0.39
COMMD4-212ENST00000565517 DLX6P56179 175 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF273Q14593 569 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 MED22Q15528 200 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 UNQ9370/PRO34162Q6UXP9 181 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 LDLRAD3Q86YD5 345 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 PDZD9Q8IXQ8 264 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 HEXA-AS1Q9H8Q6 139 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 ISYNA1Q9NPH2 558 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 POMT1Q9Y6A1 747 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
COMMD4-212ENST00000565517 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 A0A0G2JK05 382 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 A0A0U1RQK1 487 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 SIRPB1O00241 398 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 DEGS1O15121 323 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-212ENST00000565517 CSN2P05814 226 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 MELTFP08582 738 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF728P0DKX0 622 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF44P15621 663 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 CCL3L1P16619 93 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 OR3A1P47881 315 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 COMPP49747 757 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-212ENST00000565517 DLX1P56177 255 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 ERVFRD-1P60508 538 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 ACTG1P63261 375 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 KLRD1Q13241 179 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 IL13RA2Q14627 380 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 RSU1Q15404 277 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 MIDNQ504T8 468 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF184Q99676 751 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-212ENST00000565517 FAM192AQ9GZU8 254 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 CHST6Q9GZX3 395 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 METTL9Q9H1A3 318 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 PCDHB16Q9NRJ7 776 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 BLOC1S6Q9UL45 172 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 FAM96BQ9Y3D0 163 aa12.61□□□□□ -0.39
COMMD4-212ENST00000565517 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-212ENST00000565517 PIN1P1O15428 100 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 ZNF780AO75290 641 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-212ENST00000565517 FBP1P09467 338 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 OR3A4PP47883 348 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 P2RX3P56373 397 aa12.6□□□□□ -0.39
COMMD4-212ENST00000565517 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-212ENST00000565517 EDDM3AQ14507 147 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 609.1 ms