RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	RNF7	Q9UBF6	113 aa		4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC23A2	Q9UGH3	650 aa		4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	NAT8	Q9UHE5	227 aa		4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	MRM2	Q9UI43	246 aa	Known RBP	4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	FBXO4	Q9UKT5	387 aa		4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	CLDN16	Q9Y5I7	305 aa		4.85	□□□□□ -1.63
CHD9-210	ENST00000564582	DOCK6	Q96HP0	2047 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	NSG1	A0A0A6YYJ2	146 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		A0A1B0GWA3	101 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	XKRY2	A2RUG3	117 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		A6NCN8	305 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CBY3	A6NI87	242 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	NKX6-3	A6NJ46	265 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		H0YL77	283 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		K7ERU9	68 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		K7N7A8	449 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CCS	O14618	274 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	HSD17B6	O14756	317 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	NKX2-8	O15522	239 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	DNPH1	O43598	174 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF217	O75362	1048 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	PITX3	O75364	302 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CBR3	O75828	277 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	OR6A2	O95222	327 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CER1	O95813	267 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SCGB1D1	O95968	90 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	MT-ATP6	P00846	226 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	IFNA5	P01569	189 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	AMBP	P02760	352 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	THY1	P04216	161 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	REG1A	P05451	166 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	UMOD	P07911	640 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SFTPB	P07988	381 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	MMP7	P09237	267 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RD3L	P0DJH9	198 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	OR13C7	P0DN81	318 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	AKR1A1	P14550	325 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF708	P17019	499 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TMEM11	P17152	192 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	UCP1	P25874	307 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CMPK1	P30085	196 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	BMI1	P35226	326 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	HRH1	P35367	487 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	PSMB10	P40306	273 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC6A8	P48029	635 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SOX2	P48431	317 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RAB28	P51157	221 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF133	P52736	654 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	PDX1	P52945	283 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TPPP2	P59282	170 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	UBE2G2	P60604	165 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SELENOT	P62341	195 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RAB11A	P62491	216 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RPL23A	P62750	156 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	BEX3	Q00994	111 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CFHR1	Q03591	330 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ENDOG	Q14249	297 aa	Known RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	FZD2	Q14332	565 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF141	Q15928	474 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ITPRIPL2	Q3MIP1	535 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ANXA2R	Q3ZCQ2	193 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	MORN2	Q502X0	79 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TMEM41B	Q5BJD5	291 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TCEAL5	Q5H9L2	206 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	LINC01590	Q5TEZ4	76 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	WBP2NL	Q6ICG8	309 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC8B1	Q6J4K2	584 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TMEM184A	Q6ZMB5	413 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	C1QL2	Q7Z5L3	287 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	LHFPL1	Q86WI0	220 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	C20orf196	Q8IYI0	205 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	LGI3	Q8N145	548 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	MTURN	Q8N3F0	131 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CHST4	Q8NCG5	386 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF738	Q8NE65	137 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	OR4D6	Q8NGJ1	314 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	OR5L1	Q8NGL2	311 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	OR4D5	Q8NGN0	318 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	FRZB	Q92765	325 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	FGF13	Q92913	245 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	FGF14	Q92915	247 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	ARRDC3	Q96B67	414 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	C10orf35	Q96D05	121 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CNRIP1	Q96F85	164 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC25A44	Q96H78	314 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC35E1	Q96K37	410 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	CMKLR1	Q99788	373 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	TM2D2	Q9BX73	214 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	S1PR5	Q9H228	398 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	RBKS	Q9H477	322 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	PLEKHF2	Q9H8W4	249 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	GSKIP	Q9P0R6	139 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	NAGK	Q9UJ70	344 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	PADI3	Q9ULW8	664 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582		R4GMQ9	66 aa		4.84	□□□□□ -1.63
CHD9-210	ENST00000564582	NLRC5	Q86WI3	1866 aa		4.83	□□□□□ -1.64
CHD9-210	ENST00000564582	TNS1	Q9HBL0	1735 aa	Known RBP	4.83	□□□□□ -1.64
CHD9-210	ENST00000564582	TRAV8-7	A0A075B6U6	113 aa		4.83	□□□□□ -1.64

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