RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 IGKV1D-12P01611 117 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 RBP4P02753 201 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 HKR1P10072 659 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 MYF6P23409 242 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 LMO1P25800 156 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 MAPK3P27361 379 aaPredicted RBP10.97□□□□□ -0.65
CLK3-216ENST00000564468 DUSP1P28562 367 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 BDKRB2P30411 391 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 ZP1P60852 638 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 RIPK1Q13546 671 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 GRK1Q15835 563 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 MIDNQ504T8 468 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 C17orf107Q6ZR85 190 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 LDLRAD3Q86YD5 345 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 TNFAIP8L1Q8WVP5 186 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 PGLYRP3Q96LB9 341 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
CLK3-216ENST00000564468 CDCA4Q9BXL8 241 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 DPAGT1Q9H3H5 408 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 PCDHB16Q9NRJ7 776 aa10.97□□□□□ -0.65
CLK3-216ENST00000564468 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
CLK3-216ENST00000564468 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
CLK3-216ENST00000564468 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 TMEM82A0PJX8 343 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 C17orf98A8MV24 154 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 GPX5O75715 221 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 CRYBA1P05813 215 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 MELTFP08582 738 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 ZNF728P0DKX0 622 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 ZNF44P15621 663 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 CELP19835 753 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 CFPP27918 469 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 ERP29P30040 261 aaKnown RBP10.96□□□□□ -0.65
CLK3-216ENST00000564468 ZNF93P35789 620 aaPredicted RBP10.96□□□□□ -0.65
CLK3-216ENST00000564468 SNU13P55769 128 aaKnown RBP10.96□□□□□ -0.65
CLK3-216ENST00000564468 RPL15P61313 204 aaKnown RBP10.96□□□□□ -0.65
CLK3-216ENST00000564468 KLRD1Q13241 179 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 RSU1Q15404 277 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 DDI2Q5TDH0 399 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 ZFP41Q8N8Y5 198 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 OR51A2Q8NGJ7 313 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 FAM192AQ9GZU8 254 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 LINC00312Q9Y6C7 94 aa10.96□□□□□ -0.65
CLK3-216ENST00000564468 MEGF8Q7Z7M0 2845 aa10.96□□□□□ -0.66
CLK3-216ENST00000564468 SIRPB1O00241 398 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 GABRPO00591 440 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 DEGS1O15121 323 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 ZNF780AO75290 641 aaPredicted RBP10.95□□□□□ -0.66
CLK3-216ENST00000564468 OR2H2O95918 312 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
CLK3-216ENST00000564468 CALCBP10092 127 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 CCL3L1P16619 93 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 FSTP19883 344 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 SAA4P35542 130 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 TGFBR2P37173 567 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 PTGFRP43088 359 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 LGALS4P56470 323 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 SCN1BQ07699 218 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 ZNF273Q14593 569 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 SPHARQ15513 63 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 IZUMO2Q6UXV1 221 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 RNF144BQ7Z419 303 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 ZNF714Q96N38 554 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 CHST6Q9GZX3 395 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 METTL9Q9H1A3 318 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 FOXJ3Q9UPW0 622 aa10.95□□□□□ -0.66
CLK3-216ENST00000564468 UBE2J1Q9Y385 318 aaPredicted RBP10.95□□□□□ -0.66
CLK3-216ENST00000564468 PNMA8CA0A1B0GUJ8 204 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 PSPNO60542 156 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 CSN2P05814 226 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
CLK3-216ENST00000564468 IER3P46695 156 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 OR3A1P47881 315 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 P2RX3P56373 397 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK3-216ENST00000564468 SLC35A2P78381 396 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 DOC2BQ14184 412 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 GPR176Q14439 515 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 ASPHD2Q6ICH7 369 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 ASCL4Q6XD76 172 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 TRAPPC6BQ86SZ2 158 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 CDH26Q8IXH8 852 aa10.94□□□□□ -0.66
CLK3-216ENST00000564468 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms